DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tg and tgm2a

DIOPT Version :9

Sequence 1:NP_609174.1 Gene:Tg / 34093 FlyBaseID:FBgn0031975 Length:776 Species:Drosophila melanogaster
Sequence 2:NP_001004647.1 Gene:tgm2a / 447909 ZFINID:ZDB-GENE-040912-78 Length:679 Species:Danio rerio


Alignment Length:737 Identity:243/737 - (32%)
Similarity:364/737 - (49%) Gaps:103/737 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 VLGVLKVDLCLEDNHEEHHTSHFYAAAAKEALVVRRGEPFRLKIHFNR-DYSPSKDAISFIFTVA 116
            |:.:..:||..|.|:..||| |....   :.|:||||:.|.:.:|... .:..:.|.|.||    
Zfish     4 VVEIGSIDLACEVNNTNHHT-HLNGV---DRLIVRRGQTFTIHLHLKEGTHFQNGDNIKFI---- 60

  Fly   117 DDTKPSP-------GHGTLNALVPHDGIDYLGDTLEWGAGIESHEGQTLTVLIKPPSTCPVTEWK 174
            ..|.|.|       ...:|:.::         ..|.|.|..|:| ..|:::.|...:..||..:.
Zfish    61 AQTGPIPSVEAQTKARFSLSKVI---------SRLSWSATAETH-NSTVSLSICAHTNAPVGRYT 115

  Fly   175 LDIDTKLLGDGSRSYPLPLPIYV-LFNPWCPDDQVYLEDRDQRKEYVMHDTTLIWRGSYNRLRPS 238
            |.:|.   |||     :.|..:| |||||...|.|||.:..:|:|||:....||:||:..|:...
Zfish   116 LILDQ---GDG-----VILGEFVLLFNPWGKLDSVYLANEAEREEYVLSQDGLIYRGTPKRITVL 172

  Fly   239 VWKIGQFERHVLECSLKVLGTVGRIPPAY----------RGDPVRVARALSALVNSVDDDGVLLG 293
            .|..||||..:|:..|::|..    .|.|          |.:.|.|.|.|||::||:.|.||::|
Zfish   173 PWTFGQFEHGILDICLQILDE----SPNYISDAALDCSERKNAVYVTRVLSAMINSLGDKGVVVG 233

  Fly   294 NWSEDFSGGVAPTKWTGSVEILQQFYKTQ-KSVKFAQCWNFSGVLTTIARSLGIPSRIITCYSSA 357
            |||:|:..||.||.|..|..||:|:.... ::|::.|||.|:.|..|::|:||||.|:||.:.||
Zfish   234 NWSDDYEDGVKPTVWKDSCSILRQWSNEGCRAVRYGQCWVFAAVACTVSRALGIPCRVITNFGSA 298

  Fly   358 HDTQASLTVDVFIDANNKKLDAETTDSIWNYHVWNELWMQRPDLGVGEHGTFDGWQVVDATPQEA 422
            .|:...|.::.|.:..::.:   ..|||||||||.|.||.||||.:|    ::|||..|.|||..
Zfish   299 RDSNGDLIMERFYNEFDENI---ADDSIWNYHVWVENWMTRPDLALG----YEGWQASDPTPQHR 356

  Fly   423 SDNMYRVGPASVAAVKNGDILRPFDGGFVFAEVNADKLYWRYNGPSQPLKL-------LRKDTLA 480
            ||.::..|||||.|:|.|::...||..||:||||||.:.:        :||       :...|..
Zfish   357 SDGVFCCGPASVRAIKEGELTFKFDVPFVYAEVNADVVEY--------IKLRDGRVFKMGGSTTE 413

  Fly   481 IGHLISTKAVLKWEREDITDTYKHAERSEEERSTMLKALKQSRHAFSRYYLNDNFNDIEFDMELK 545
            ||..||||||.:.||||||..||:.|.|||||    |..|::.| .::.........:...:.:.
Zfish   414 IGKSISTKAVGRDEREDITHNYKYPEGSEEER----KVFKKANH-HNKLAQAGEEPGLHIKIRVT 473

  Fly   546 DDIKIGQSFSVVLKVSNKSESRTHMATGQISC------DAVLYTG-VGAVEVKTLGFELELEPKS 603
            .|::||..|.|..::.|.:     |.|.  ||      .||.|.| :|  |...||...|:...|
Zfish   474 PDMQIGSDFDVYAEIKNNT-----MVTK--SCRVMFYAQAVSYNGTLG--ETCGLGDFTEMSLAS 529

  Fly   604 SD--YVRMEVIFEEYYDKLSSQAAFQISAAAKVKDTDYDYYAQDDFRVRKPDIKFQ-LGEAAIVA 665
            ||  .|.:.:.:.||...::.....::.......:|...|.|:....:..|:|... ||...:  
Zfish   530 SDGGKVTLRLEYAEYSKAITQDRMIKLVGLLIDAETREFYRAKKTIVLDAPEIIVNILGVPKV-- 592

  Fly   666 QKELDVILRLENPLPIPLHKGVFTVEGPGIE--QPLKFKIAEIPVGGTAAATFKYTPPYAGRGTM 728
            .:.|...|.|:||||.||...|||:.|..:.  :|:..::..|.....|.|..::.|...|:..:
Zfish   593 GRNLVADLALQNPLPEPLENCVFTIHGANLTDGKPITHEVGTIGPKEFATAKVEFAPKLPGQRKL 657

  Fly   729 LAKFTSKELDDVDGYRH---YE 747
            :..|.|.:|.:::.|.:   ||
Zfish   658 IIDFASDKLHNIETYENLVIYE 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TgNP_609174.1 Transglut_N 56..179 CDD:279240 33/130 (25%)
TGc 324..419 CDD:214673 41/94 (44%)
Transglut_C 538..644 CDD:279295 27/114 (24%)
Transglut_C 652..750 CDD:279295 29/102 (28%)
tgm2aNP_001004647.1 Transglut_N 6..119 CDD:279240 33/130 (25%)
TGc 263..353 CDD:214673 41/96 (43%)
Transglut_C 466..561 CDD:279295 25/103 (24%)
Transglut_C 580..677 CDD:279295 27/98 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596880
Domainoid 1 1.000 99 1.000 Domainoid score I6999
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D153729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11590
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.910

Return to query results.
Submit another query.