DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tg and tgm2b

DIOPT Version :9

Sequence 1:NP_609174.1 Gene:Tg / 34093 FlyBaseID:FBgn0031975 Length:776 Species:Drosophila melanogaster
Sequence 2:NP_997821.2 Gene:tgm2b / 323856 ZFINID:ZDB-GENE-030131-2576 Length:679 Species:Danio rerio


Alignment Length:728 Identity:233/728 - (32%)
Similarity:358/728 - (49%) Gaps:104/728 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 DLCLEDNHEEHHTSHFYAAAAKEALVVRRGEPFRLKIHFNR-DYSPSKDAISFIFTVADDTKPSP 123
            ||..:.|:.:|||.    ....:.|:||||:.|.:.:..|. .|.|....|:    :..:|.|.|
Zfish     9 DLACKFNNTDHHTE----LNGTDRLIVRRGQAFTINLQLNSGSYQPGYSQIN----ITAETGPDP 65

  Fly   124 --GHGT-----LNALVPHDGIDYLGDTLEWGAGIESHEGQTLTVLIKPPSTCPVTEWKLDIDTKL 181
              .:||     |::.|         |:..|.|.:.|..|:::.:.|......|:..:.|.:|.: 
Zfish    66 QQQYGTRAVFSLSSEV---------DSSCWSAAVSSPPGESVCLSICAAPDAPIGHYTLTLDER- 120

  Fly   182 LGDGSRSYPLPLPIYVLFNPWCPDDQVYLEDRDQRKEYVMHDTTLIWRGSYNRLRPSVWKIGQFE 246
                     :.:...:|||||||.|.||:::.::..|||:....:|:||......|..|..||||
Zfish   121 ---------IQIQFILLFNPWCPLDVVYMDNEEKLAEYVLAQDGIIFRGDAGYPVPLAWNFGQFE 176

  Fly   247 RHVLECSLKVLGTVGRIPPAYRGDPVR----------VARALSALVNSVD-DDGVLLGNWSEDFS 300
            ..:|:...::|.    :.|.:|.:|.:          |.|.|||::||.| |.|||.|.|.:.|.
Zfish   177 EGILDACFRILD----MNPKHRRNPAKDCSGRRNVIYVTRVLSAMINSNDQDSGVLEGCWRDTFD 237

  Fly   301 GGVAPTKWTGSVEILQQFYKTQ-KSVKFAQCWNFSGVLTTIARSLGIPSRIITCYSSAHDTQASL 364
            |||:|..|.|||:||:.:.::. ..|::.|||.|:.|..|:||::|||.|::|.|.|||||.::|
Zfish   238 GGVSPMSWGGSVQILRTWDRSSCLPVRYGQCWVFAAVACTVARAVGIPCRVVTNYYSAHDTNSNL 302

  Fly   365 TVDVFIDANNKKLDAETTDSIWNYHVWNELWMQRPDLGVGEHGTFDGWQVVDATPQEASDNMYRV 429
            .::.:::...:...:.|.|.|||||.|.|.||.|.||..|    |||||..|.||||.|:.::..
Zfish   303 LIERYVNEKGEVDHSSTRDMIWNYHCWVESWMGRSDLPPG----FDGWQASDPTPQEKSEGVFCC 363

  Fly   430 GPASVAAVKNGDILRPFDGGFVFAEVNADKLYW--RYNGPSQPLKLLRKDTLAIGHLISTKAVLK 492
            ||..|.|:|.|::...:|..|||||||||.:|:  ..:|.::.:...:|    :|..||||:|.:
Zfish   364 GPVPVRAIKEGELTFKYDAPFVFAEVNADLVYFLKSKDGSTRKINYDQK----VGQKISTKSVGR 424

  Fly   493 WEREDITDTYKHAERSEEERSTMLKALKQSRHAFSRYYLNDNFN-DIEFDMELKDDIKIGQSFSV 556
            .||||||..||:.|.|.:||....||..|::      .|.:..| .:...::|...::.|..|.|
Zfish   425 DEREDITHLYKYPEGSADERRVFEKANHQNK------LLQEKQNTGLNITIKLSSGVRKGCDFDV 483

  Fly   557 VLKVSN--KSESRTHMATGQISCDAVLYTGVGAVEVKTLGFE----LELEPKSSDYVRMEVIFEE 615
            ...|:|  ..|.:..:.   .:..||.|.||...|   .||:    :||.|.....|.:.:.:.:
Zfish   484 FAIVTNGTAEEKKCRLV---FASRAVSYNGVIGRE---CGFKDLLNVELPPGGERKVPLRLNYSK 542

  Fly   616 YYDKLSSQAAFQISAAAKVKDTDYDYYAQD------DFRVRKPDIKFQ-LGEAAIVAQKELDVIL 673
            |.:.|:.....::.|..      .||..:|      |..:..|:||.: |||..  ..::|...|
Zfish   543 YCNNLTEDNLIRLGALL------IDYSTRDAIMAMRDIVLDDPEIKIRILGEPK--ENRKLAAEL 599

  Fly   674 RLENPLPIPLHKGVFTVE------GPGIEQPLKFKIAEIPVGGTAAATFKYTPPYAGRGTMLAKF 732
            .::||||..|....||:|      |..|...|.   :.|..|..|.|...:||..:|...:|..|
Zfish   600 TIQNPLPEALQSCCFTIEGANLTGGDSITHTLD---SSIEPGQEAKAKIYFTPTQSGLRKLLVDF 661

  Fly   733 TSKELDDVDGYRH 745
            .|.:|..|.|||:
Zfish   662 NSDKLGHVRGYRN 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TgNP_609174.1 Transglut_N 56..179 CDD:279240 31/126 (25%)
TGc 324..419 CDD:214673 42/94 (45%)
Transglut_C 538..644 CDD:279295 24/111 (22%)
Transglut_C 652..750 CDD:279295 34/101 (34%)
tgm2bNP_997821.2 Transglut_N 4..118 CDD:279240 31/125 (25%)
YebA <254..361 CDD:224224 47/110 (43%)
TGc 260..353 CDD:214673 42/96 (44%)
Transglut_C 467..565 CDD:279295 24/109 (22%)
Transglut_C 579..679 CDD:279295 34/101 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596881
Domainoid 1 1.000 99 1.000 Domainoid score I6999
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D153729at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11590
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
65.910

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