DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12560 and si:ch73-106k19.2

DIOPT Version :10

Sequence 1:NP_609173.2 Gene:CG12560 / 34092 FlyBaseID:FBgn0031974 Length:278 Species:Drosophila melanogaster
Sequence 2:XP_009304583.3 Gene:si:ch73-106k19.2 / 799646 ZFINID:ZDB-GENE-131121-349 Length:284 Species:Danio rerio


Alignment Length:202 Identity:51/202 - (25%)
Similarity:85/202 - (42%) Gaps:29/202 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 LKSIENEYDFFGFSTRLKPVVE-YIGNKYYANKKLHT----VDTVWYAASKELVD---------- 146
            :|:.|.:::.:...::.|..:: ::......||...|    ||.....|.:|..|          
Zfish    63 VKNREGDFNIYSIYSKSKDSLKSFLDTPGVINKDAFTLLAGVDIRHLGAVQEFADQQGIPSKVQG 127

  Fly   147 TFNIQV------------PPGLSLQHLTIEDAEIINENWPH-NKPGSIDFVRSLIKYNINLGAYD 198
            ..|:.|            ..|||...|:...|.::|..|.: ....|.:.|.:.|.:|.:|...:
Zfish   128 VMNVLVLQDQQQLQFKDRHAGLSFAPLSTAHAHLVNSTWKYGGDSSSYNSVLNYISHNPSLCVIE 192

  Fly   199 D-KGKLVAWCLRLPIGSLGLLQVLESHKRLGLGSLLVKSMAKKISAAGDQVLAPVVTKNTPSRSM 262
            : :.:.|:|.|..|..:||||..|..|:..|...|||..|:|.:...|..|...|..:|.||..:
Zfish   193 EGQTEPVSWLLVYPHAALGLLYTLPQHRCKGHARLLVSIMSKNLLEQGHPVYCFVEEENKPSYKL 257

  Fly   263 FEKLGFR 269
            |..|||:
Zfish   258 FTSLGFQ 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12560NP_609173.2 FR47 193..277 CDD:117022 27/78 (35%)
si:ch73-106k19.2XP_009304583.3 None

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