DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12560 and Glyatl2

DIOPT Version :9

Sequence 1:NP_609173.2 Gene:CG12560 / 34092 FlyBaseID:FBgn0031974 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_599157.2 Gene:Glyatl2 / 171179 RGDID:621231 Length:295 Species:Rattus norvegicus


Alignment Length:140 Identity:30/140 - (21%)
Similarity:47/140 - (33%) Gaps:36/140 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 ENWPH-----NKPGSIDFVRSLIKYNINLGAYDDKGK----------LVAWCLRLPIGS----LG 216
            :.||.     .:|...|....|..||.....|....|          ::.|...|.|.|    ||
  Rat    47 DKWPDFNTVVIRPQEQDMTDDLDHYNNTYLIYSKDPKHCQEFLGSSDVINWKQHLQIQSSQADLG 111

  Fly   217 LLQVLESHKRLGLGSL--------LVKSMAKKISAAGDQVLAPVVTKNTPSRSMFEKLGFRAID- 272
              :|:|:.....||.:        :|...|||::.:.......||:...|:....:...|..:| 
  Rat   112 --KVIENLGATNLGKVKHKQCFLYMVSHTAKKLTPSLVDAKHLVVSSEKPTPFDHQLFKFARLDV 174

  Fly   273 ------NTYW 276
                  |:.|
  Rat   175 KHAALVNSIW 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12560NP_609173.2 FR47 193..277 CDD:117022 23/113 (20%)
Glyatl2NP_599157.2 Gly_acyl_tr_N 1..205 CDD:399190 30/140 (21%)
Gly_acyl_tr_C 206..294 CDD:117021
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1221333at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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