DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12560 and Glyat

DIOPT Version :10

Sequence 1:NP_609173.2 Gene:CG12560 / 34092 FlyBaseID:FBgn0031974 Length:278 Species:Drosophila melanogaster
Sequence 2:NP_666047.1 Gene:Glyat / 107146 MGIID:2147502 Length:296 Species:Mus musculus


Alignment Length:282 Identity:56/282 - (19%)
Similarity:99/282 - (35%) Gaps:76/282 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 NSLVEIPR-GEWTKLRDLYVARDTDPQGYPCINNFIKWVEIDPQLKVNFLSLNG--DWQSDGTFV 66
            |::|..|: .|.|...|.|:             |..:....|||....||..:.  :|:..    
Mouse    54 NTVVVRPQEQEMTDDLDFYI-------------NTYQVYSKDPQNCQEFLESSEVINWKQH---- 101

  Fly    67 LTLR-SDTHMNHIYFNTLSENLDRVTKALECLKSIENEYDFFGFSTRLKPVVEYIGNKYYANKKL 130
            |.:: |.:|:|               |.::.|.||::      |..:....:.|:.::  ..|||
Mouse   102 LQIQSSQSHLN---------------KTIQNLASIQS------FQIKHSENILYVSSE--TIKKL 143

  Fly   131 HTVDTVWYAASKELVDTFNIQVPPG---------LSLQHLTIEDAEIINENWPH-NKPGSIDFVR 185
            .          ..|:||.|:....|         ..|..|.:..|.::|:.|.. ....|..|:.
Mouse   144 F----------PSLLDTKNLSTGSGKPKAIDQDKFKLSSLDVVHAALVNKFWLFGGNERSQRFIE 198

  Fly   186 SLIKYNINLGAYDDKGKLVAWCLRLPIGSLGLLQVLESHKRLGLGSLLVKSMAKKISAAGDQVLA 250
            ..||...:......:|...:|.|....|.:.:...:..::..||.|.:|.|.        ||::.
Mouse   199 RCIKNFPSSCVLGPEGTPASWTLMDQTGEMRMGGTMPEYRLQGLVSFVVHSQ--------DQIMT 255

  Fly   251 ----PVVTKNTPSRSMFEKLGF 268
                ||.:....|....:|:.:
Mouse   256 KRGYPVYSHTEKSNIAMQKMSY 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12560NP_609173.2 FR47 193..277 CDD:117022 15/80 (19%)
GlyatNP_666047.1 Gly_acyl_tr_N 1..206 CDD:461802 41/201 (20%)
Gly_acyl_tr_C 207..295 CDD:117021 15/79 (19%)

Return to query results.
Submit another query.