DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Serpinb6c

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001369781.1 Gene:Serpinb6c / 97848 MGIID:2145481 Length:379 Species:Mus musculus


Alignment Length:434 Identity:113/434 - (26%)
Similarity:196/434 - (45%) Gaps:74/434 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 ANSVLNFANILGQHLANGKTQIYSPLSIVHSLALLLLGAKGRSYEELSTVFDIPDTSR-----LH 168
            |...||...|||:.  ..|....||:||..:|.::||||||.:..:::....:...|.     :|
Mouse    10 ATFALNLLKILGED--RSKNVFLSPISISSALVMVLLGAKGTTAIQITQALSLGKCSSSEDGDVH 72

  Fly   169 EQFGLMLQDLQQP-TREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPD 232
            :.|.|:|.::.:. |:.::.|                             ||.||.:..:.:...
Mouse    73 QGFQLLLSEVNKTGTQYSLKA-----------------------------ANRLFGEKTFDILAS 108

  Fly   233 YRRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIA-SDIPQTTRMILANALYFK 296
            ::....:.|.::::..||:|:...:|.:||.:||:.|::.|:.::: ..|...|.:||.||:|||
Mouse   109 FKDSCHKFYEAEMEELDFKGATEQSRQHINTWVAKKTEDKIKELLSPGTIHSNTPLILVNAVYFK 173

  Fly   297 AFWETDFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNLSTMYI 361
            ..||..|.:..||...|..:....:|   ||||.....:......|:..||:.|||.||...|.|
Mouse   174 GKWEKQFNKEDTREMPFKVSKNEEKP---VQMMFQKSTFKMTYVEEISTKILLLPYVGNELNMII 235

  Fly   362 IQPFKSSVRELMALQKRLTADK-IE-SMISRMYRRAALVAFPKMHLTESVNLKTVMQRMGLGGIF 424
            :.|.:..  ||..::|.:|.:| || :.:.||......|..|...|.|:.::|.|:.::|:...|
Mouse   236 MLPDEHV--ELSTVEKEITHEKFIEWTRLDRMKGEKVEVFLPWFKLEENYDMKDVLCKLGMTDAF 298

  Fly   425 SAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNEQGTEAA 489
            ...:.|.|.|::.:.                            |.:.:::||....|||:|:||.
Mouse   299 EEGRADFSGISSKQG----------------------------LFLSNVIHKSVVEVNEEGSEAT 335

  Fly   490 ASSVTYLKKSGPDV-LFRGDTPFMVLVRHDPTKLVLFYGLINEP 532
            |::...||.|.... .|..:.||:..::|..|..:||.|.::.|
Mouse   336 AATTIVLKGSSRSTPCFCVNRPFIFFIQHIKTNEILFLGRLSSP 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 110/425 (26%)
Serpinb6cNP_001369781.1 serpin 2..379 CDD:422956 112/432 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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