DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and SRP3

DIOPT Version :10

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_176586.1 Gene:SRP3 / 842706 AraportID:AT1G64030 Length:385 Species:Arabidopsis thaliana


Alignment Length:460 Identity:101/460 - (21%)
Similarity:165/460 - (35%) Gaps:145/460 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 ANILGQHLANGKTQ----IYSPLSIVHSLALLLLGAKG-------------RSYEELSTVFDIPD 163
            |.||..|:.:...:    |:||.||..::.:...|..|             .|.:||.|||    
plant    14 AMILSGHVLSSAPKDSNVIFSPASINSAITMHAAGPGGDLVSGQILSFLRSSSIDELKTVF---- 74

  Fly   164 TSRLHEQFGLMLQDLQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYT 228
                               ||            .:|.:.::|.|  .|..::..||||:......
plant    75 -------------------RE------------LASVVYADRSA--TGGPKITAANGLWIDKSLP 106

  Fly   229 LNPDYRRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIA-SDIPQTTRMILANA 292
            .:|.::.:....:.:.....||.......|..:|::|..||.|.|::::. ..:...|..|.|||
plant   107 TDPKFKDLFENFFKAVYVPVDFRSEAEEVRKEVNSWVEHHTNNLIKDLLPDGSVTSLTNKIYANA 171

  Fly   293 LYFKAFWETDFIESATRPDNFY-PNGEGTEPVMRVQMMATGGAYPYHEDHEL-------GCKIIG 349
            |.||..|:..|.:..||.::|| .||             |..:.|:...:|.       |.|::.
plant   172 LSFKGAWKRPFEKYYTRDNDFYLVNG-------------TSVSVPFMSSYENQYVRAYDGFKVLR 223

  Fly   350 LPY-RGNLST-----MYIIQPFKSSVRELMALQKRLTADKIESMISRMYRRAALVAFPKMHLTES 408
            ||| ||:..|     ||...|.|....:.:..:...|...::|.|............||..:...
plant   224 LPYQRGSDDTNRKFSMYFYLPDKKDGLDDLLEKMASTPGFLDSHIPTYRDELEKFRIPKFKIEFG 288

  Fly   409 VNLKTVMQRMGLGGIFSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDI 473
            .::.:|:.|:||..:                                                .:
plant   289 FSVTSVLDRLGLRSM------------------------------------------------SM 305

  Fly   474 VHKVDFTVNEQGTEAAAS--------SVTYL---KKSGPDVLFRGDTPFMVLVRHDPTKLVLFYG 527
            .||....::|:|.||||:        |:.::   ||    :.|..|.||:.|:|.:.|..|||.|
plant   306 YHKACVEIDEEGAEAAAATADGDCGCSLDFVEPPKK----IDFVADHPFLFLIREEKTGTVLFVG 366

  Fly   528 LINEP 532
            .|.:|
plant   367 QIFDP 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 serpin28D-like_insects 111..532 CDD:381061 100/458 (22%)
SRP3NP_176586.1 serpinP_plants 8..371 CDD:381001 100/458 (22%)

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