DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and AT1G62170

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001185292.1 Gene:AT1G62170 / 842513 AraportID:AT1G62170 Length:466 Species:Arabidopsis thaliana


Alignment Length:558 Identity:121/558 - (21%)
Similarity:194/558 - (34%) Gaps:172/558 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 MQRRHQMQQEAQQHIQAIPPAVPLQSPGLVNGLGNQN------DPALNRIS-GTSVKPSNLPAAY 95
            :.:.|..:::.::  |.|..:..:.||.|     ::|      .|:|:.|. |.::|..|..|.:
plant    20 LSKTHLKKKKTKK--QKIRKSQEITSPSL-----SKNTDLVIASPSLSNIDVGEAMKKQNDVAIF 77

  Fly    96 SNGYVDLATSDRIANSVLNFANILGQHLANGKTQIYSPLSIVHSLALLLLGAKGRSYEEL-STVF 159
            ..|.|        .:||...:|.           ::||.||..:|.::...:.|...||| |.:.
plant    78 LTGIV--------ISSVAKNSNF-----------VFSPASINAALTMVAASSGGEQGEELRSFIL 123

  Fly   160 DIPDTSRLHEQFGLMLQDLQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQ 224
            ....:|...|        |....||..|.  .|.|            ..:.|..::.:.||::..
plant   124 SFLKSSSTDE--------LNAIFREIASV--VLVD------------GSKKGGPKIAVVNGMWMD 166

  Fly   225 TGYTLNP-----------------DYRR---------VIVEVYASDLQIQ---DFE----GSPAT 256
            ...::||                 |:|.         :.|.:..|...|.   ||:    .|...
plant   167 QSLSVNPLSKDLFKNFFSAAFAQVDFRSKCNVLNKLGLAVSLLESIFHISTLFDFKFALIRSAEE 231

  Fly   257 ARYNINAYVAQHTKNHIENII-ASDIPQTTRMILANALYFKAFWETDFIESATRPDNFY-PNGEG 319
            .|..:||:.:.||...|:::: ...:...|..:..:|||||..||..:.:|.|:...|| .||  
plant   232 VRTEVNAWASSHTNGLIKDLLPRGSVTSLTDRVYGSALYFKGTWEEKYSKSMTKCKPFYLLNG-- 294

  Fly   320 TEPVMRVQMMATGGAYPYHEDHEL-------GCKIIGLPYR-GNLST-----MYIIQPFKSSVRE 371
                       |..:.|:....|.       |.|::.|||| |..:|     |||..|.|..  |
plant   295 -----------TSVSVPFMSSFEKQYIAAYDGFKVLRLPYRQGRDNTNRNFAMYIYLPDKKG--E 346

  Fly   372 LMALQKRLTADKIESMISRMYRRAALVAFPKMHLTESVNLKTVMQRMGLGGIFSAVQNDLSLIAT 436
            |..|.:|:|:..               .|...|..|                             
plant   347 LDDLLERMTSTP---------------GFLDSHNPE----------------------------- 367

  Fly   437 NEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVD-DIVHKVDFTVNEQGTEAAASSVTYLKKSG 500
                |...:|...:...:.:.......|.||..:| ....|....::|:||||...:.......|
plant   368 ----RRVKVGKFRIPKFKIEFGFEASSAFSDFELDVSFYQKTLIEIDEKGTEAVTFTAFRSAYLG 428

  Fly   501 ----PDVLFRGDTPFMVLVRHDPTKLVLFYGLINEPPA 534
                ..:.|..|.||:.|:|.:.|..|||.|.|.:|.|
plant   429 CALVKPIDFVADHPFLFLIREEQTGTVLFAGQIFDPSA 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 101/469 (22%)
AT1G62170NP_001185292.1 SERPIN 69..464 CDD:294093 108/498 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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