DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and AT1G62170

DIOPT Version :10

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001185292.1 Gene:AT1G62170 / 842513 AraportID:AT1G62170 Length:466 Species:Arabidopsis thaliana


Alignment Length:558 Identity:121/558 - (21%)
Similarity:194/558 - (34%) Gaps:172/558 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 MQRRHQMQQEAQQHIQAIPPAVPLQSPGLVNGLGNQN------DPALNRIS-GTSVKPSNLPAAY 95
            :.:.|..:::.::  |.|..:..:.||.|     ::|      .|:|:.|. |.::|..|..|.:
plant    20 LSKTHLKKKKTKK--QKIRKSQEITSPSL-----SKNTDLVIASPSLSNIDVGEAMKKQNDVAIF 77

  Fly    96 SNGYVDLATSDRIANSVLNFANILGQHLANGKTQIYSPLSIVHSLALLLLGAKGRSYEEL-STVF 159
            ..|.|        .:||...:|.           ::||.||..:|.::...:.|...||| |.:.
plant    78 LTGIV--------ISSVAKNSNF-----------VFSPASINAALTMVAASSGGEQGEELRSFIL 123

  Fly   160 DIPDTSRLHEQFGLMLQDLQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQ 224
            ....:|...|        |....||..|.  .|.|            ..:.|..::.:.||::..
plant   124 SFLKSSSTDE--------LNAIFREIASV--VLVD------------GSKKGGPKIAVVNGMWMD 166

  Fly   225 TGYTLNP-----------------DYRR---------VIVEVYASDLQIQ---DFE----GSPAT 256
            ...::||                 |:|.         :.|.:..|...|.   ||:    .|...
plant   167 QSLSVNPLSKDLFKNFFSAAFAQVDFRSKCNVLNKLGLAVSLLESIFHISTLFDFKFALIRSAEE 231

  Fly   257 ARYNINAYVAQHTKNHIENII-ASDIPQTTRMILANALYFKAFWETDFIESATRPDNFY-PNGEG 319
            .|..:||:.:.||...|:::: ...:...|..:..:|||||..||..:.:|.|:...|| .||  
plant   232 VRTEVNAWASSHTNGLIKDLLPRGSVTSLTDRVYGSALYFKGTWEEKYSKSMTKCKPFYLLNG-- 294

  Fly   320 TEPVMRVQMMATGGAYPYHEDHEL-------GCKIIGLPYR-GNLST-----MYIIQPFKSSVRE 371
                       |..:.|:....|.       |.|::.|||| |..:|     |||..|.|..  |
plant   295 -----------TSVSVPFMSSFEKQYIAAYDGFKVLRLPYRQGRDNTNRNFAMYIYLPDKKG--E 346

  Fly   372 LMALQKRLTADKIESMISRMYRRAALVAFPKMHLTESVNLKTVMQRMGLGGIFSAVQNDLSLIAT 436
            |..|.:|:|:..               .|...|..|                             
plant   347 LDDLLERMTSTP---------------GFLDSHNPE----------------------------- 367

  Fly   437 NEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVD-DIVHKVDFTVNEQGTEAAASSVTYLKKSG 500
                |...:|...:...:.:.......|.||..:| ....|....::|:||||...:.......|
plant   368 ----RRVKVGKFRIPKFKIEFGFEASSAFSDFELDVSFYQKTLIEIDEKGTEAVTFTAFRSAYLG 428

  Fly   501 ----PDVLFRGDTPFMVLVRHDPTKLVLFYGLINEPPA 534
                ..:.|..|.||:.|:|.:.|..|||.|.|.:|.|
plant   429 CALVKPIDFVADHPFLFLIREEQTGTVLFAGQIFDPSA 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 serpin28D-like_insects 111..532 CDD:381061 103/474 (22%)
AT1G62170NP_001185292.1 serpinP_plants 69..464 CDD:381001 108/498 (22%)

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