DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28Dc and AT2G35580

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_181101.1 Gene:AT2G35580 / 818123 AraportID:AT2G35580 Length:374 Species:Arabidopsis thaliana


Alignment Length:498 Identity:109/498 - (21%)
Similarity:178/498 - (35%) Gaps:174/498 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 LVNGLGNQND-------PALNRISGTSVKPSNLPAAYSNGYVDLATSDRIANSVLNFANILGQHL 123
            |...:|||||       |.:|.|       .::.||.|.|  |..|:|:|.:             
plant    17 LKESVGNQNDIVLRLTAPLINVI-------LSIIAASSPG--DTDTADKIVS------------- 59

  Fly   124 ANGKTQIYSPLSIVHSLALLLLGAKGRSYEELSTVFDIPDTSRLHEQFGLMLQDLQQPTREAISA 188
                                ||.|.              .|.:||                |:|:
plant    60 --------------------LLQAS--------------STDKLH----------------AVSS 74

  Fly   189 GRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPDYRRVIVEVYASDLQIQDFEGS 253
            ....|....|:|         .|...:..||||:.:....:.|.::.:::..|.:.....||...
plant    75 EIVTTVLADSTA---------SGGPTISAANGLWIEKTLNVEPSFKDLLLNSYKAAFNRVDFRTK 130

  Fly   254 PATARYNINAYVAQHTKNHIENIIASDIPQT---TRMILANALYFKAFWETDFIESATRPDNFYP 315
            .......:|::|.:.|...|.|::.|: |::   |..|.||||:|...|::.|..|.|:..:|:.
plant   131 ADEVNREVNSWVEKQTNGLITNLLPSN-PKSAPLTDHIFANALFFNGRWDSQFDPSLTKDSDFHL 194

  Fly   316 NGEGTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPYR-----GNLSTMYIIQPFKSSVRELMAL 375
            . :||:  :||..| ||.:..|...:| |.|:|.|.||     ....:|.|..|.:.        
plant   195 L-DGTK--VRVPFM-TGASCRYTHVYE-GFKVINLQYRRGREDSRSFSMQIYLPDEK-------- 246

  Fly   376 QKRLTADKIESMISRMYRRAALVAFPKMHLTESVNLKTV-MQRMGLGGIFSAVQNDLSLIATNEA 439
                  |.:.||:.|:......:...::..:.|..:|.: :.|......|.|             
plant   247 ------DGLPSMLERLASTRGFLKDNEVLPSHSAVIKELKIPRFKFDFAFEA------------- 292

  Fly   440 TRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNEQGTEAAASSVTYLKKSGPDVL 504
              :.||.|..|.                :.:..|:||....|:|.|::|||::.           
plant   293 --SEALKGFGLV----------------VPLSMIMHKSCIEVDEVGSKAAAAAA----------- 328

  Fly   505 FRG---------------DTPFMVLVRHDPTKLVLFYGLINEP 532
            |||               |.||:.:|:...:.||||.|.:.:|
plant   329 FRGIGCRRPPPEKHDFVADHPFLFIVKEYRSGLVLFLGQVMDP 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 90/439 (21%)
AT2G35580NP_181101.1 plant_SERPIN 8..371 CDD:238998 108/496 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

Return to query results.
Submit another query.