DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and SRP2

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_179060.1 Gene:SRP2 / 815941 AraportID:AT2G14540 Length:407 Species:Arabidopsis thaliana


Alignment Length:493 Identity:112/493 - (22%)
Similarity:177/493 - (35%) Gaps:147/493 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 DPALNRISGTSVKPSNLPAAYSNGYVDLATSDRIANSVLNFANILGQHLANGKTQIYSPLSI--- 136
            ||:|:: :....|.....|..:...|.|....::.::|...:|.           ::||.||   
plant    17 DPSLSK-TNKKQKIDMQEAMKNQNEVSLLLVGKVISAVAKNSNC-----------VFSPASINAV 69

  Fly   137 ------------VHSLALLLLGAKGRSYEELSTVFDIPDTSRLHEQFGLMLQDLQQPTREAISAG 189
                        :.|..|..|  |..|.||.:.:|        ||...::.:|            
plant    70 LTVTAANTDNKTLRSFILSFL--KSSSTEETNAIF--------HELASVVFKD------------ 112

  Fly   190 RPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPDYRRVIVEVYASDLQIQDFEGSP 254
                             ....|..::...||::.:...:.|||:..:.:..:.:.....||....
plant   113 -----------------GSETGGPKIAAVNGVWMEQSLSCNPDWEDLFLNFFKASFAKVDFRHKA 160

  Fly   255 ATARYNINAYVAQHTKNHIENII-ASDIPQTTRMILANALYFKAFWETDFIESATRPDNFY-PNG 317
            ...|.::|.:.::||.:.|:.|: ...:...|..|..||||||..||..|.:|.||...|: .||
plant   161 EEVRLDVNTWASRHTNDLIKEILPRGSVTSLTNWIYGNALYFKGAWEKAFDKSMTRDKPFHLLNG 225

  Fly   318 EGTE-PVMRVQMMATGGAYPYHEDHELGCKIIGLPYR-GNLST-----MYIIQPFKSSVRELMAL 375
            :... |.||........||.       |.|::.|||| |...|     ||:..|.|..  ||..|
plant   226 KSVSVPFMRSYEKQFIEAYD-------GFKVLRLPYRQGRDDTNREFSMYLYLPDKKG--ELDNL 281

  Fly   376 QKRLTADK--IESMISRMYRRAALVAFPKMHLTESVNLKTVMQRMGLGGIFSAVQNDLSLIATNE 438
            .:|:|::.  ::|.|............||.             ::..|...|:|.||..|   |.
plant   282 LERITSNPGFLDSHIPEYRVDVGDFRIPKF-------------KIEFGFEASSVFNDFEL---NV 330

  Fly   439 ATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNEQGTEAAASSVTYL------- 496
            :....||                                 ..::|:||||||::...:       
plant   331 SLHQKAL---------------------------------IEIDEEGTEAAAATTVVVVTGSCLW 362

  Fly   497 --KKSGPDVLFRGDTPFMVLVRHDPTKLVLFYGLINEP 532
              ||.   :.|..|.||:.|:|.|.|..:||.|.|.:|
plant   363 EPKKK---IDFVADHPFLFLIREDKTGTLLFAGQIFDP 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 102/450 (23%)
SRP2NP_179060.1 SERPIN 36..397 CDD:294093 106/471 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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