DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and zgc:173729

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001103200.1 Gene:zgc:173729 / 798311 ZFINID:ZDB-GENE-071004-64 Length:439 Species:Danio rerio


Alignment Length:463 Identity:131/463 - (28%)
Similarity:213/463 - (46%) Gaps:84/463 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 FANILGQHLANGKTQIYSPLSIVHSLALLLLGAKGRSYEELSTV--FDIP--------------- 162
            |..|.|.: |:|.. .|||:||..:||::.|||||.:.:::..|  |:.|               
Zfish    16 FKKISGGN-ASGNV-FYSPVSISSALAMVSLGAKGNTADQMFKVLGFNNPPKPGGATPTPAQATQ 78

  Fly   163 ------DTSRLHEQFGLMLQDLQQPTREAISA------GRPLTDWRASSAMRSN-----RRAQRP 210
                  .....||.     |.||||.:..:.|      .:|:...:|...:.|:     ....:|
Zfish    79 KPQITCGVKSQHEP-----QALQQPQKFELPADLKKCPAQPVPGQKAEEQIHSSFNKFMSELNKP 138

  Fly   211 GA-HEVHLANGLFTQTGYTLNPDYRRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIE 274
            || :.:.|||.|:.:..|.....:.......||:.|:..||:.....:|.|||.:|.::|:..|:
Zfish   139 GAPYVLSLANRLYGEQTYQFLEKFLSDAKTYYAAGLEKVDFKNKSEASRVNINKWVEKNTQEKIK 203

  Fly   275 NIIASD-IPQTTRMILANALYFKAFWETDFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPYH 338
            :::.|. |...||::|.||:|||..||..|.:.|||...|..|...|:|   |:||.....:...
Zfish   204 DLLPSGAIDAMTRLVLVNAIYFKGNWEKKFTKEATRDGQFKLNKNQTKP---VKMMHQKARFSLA 265

  Fly   339 EDHELGCKIIGLPYRGNLSTMYIIQP--FKSSVRELMALQKRLTADKIESMI--SRMYRRAALVA 399
            ...|:..:::.|||.|...:|.||.|  .:.:...|..|:|.||.:|:....  |.|.::...|:
Zfish   266 SIPEMNSQVLELPYAGKNLSMLIILPDQIEDATTGLQKLEKALTYEKLMEWTKPSMMCQQEVQVS 330

  Fly   400 FPKMHLTESVNLKTVMQRMGLGGIFSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGA 464
            .||....::.::|:::..||:..:|             :..:.|..|.:|               
Zfish   331 LPKFKTEQTYDMKSLLVSMGMEDVF-------------DPQKVNLTGMSS--------------- 367

  Fly   465 RSDLVVDDIVHKVDFTVNEQGTEAAA-----SSVTYLKKSGPDVLFRGDTPFMVLVRHDPTKLVL 524
            .:|||:..::||....|||:||||||     :::|.:..|.|.. |..|.||:..:||:||..:|
Zfish   368 SNDLVLSKVIHKAFVEVNEEGTEAAAATGVIATLTSMPLSPPKT-FTADHPFIFFIRHNPTNAIL 431

  Fly   525 FYGLINEP 532
            |||..:.|
Zfish   432 FYGRFSSP 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 128/456 (28%)
zgc:173729NP_001103200.1 SERPIN 4..439 CDD:294093 130/461 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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