DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Serpina3a

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001161177.1 Gene:Serpina3a / 74069 MGIID:1921319 Length:422 Species:Mus musculus


Alignment Length:443 Identity:104/443 - (23%)
Similarity:186/443 - (41%) Gaps:90/443 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 IANSVLNFANILGQHLA---NGKTQIYSPLSIVHSLALLLLGAKGRSYEEL--STVFDIPDT--S 165
            :|:...:||..|.:.||   ..|..::|||||..:|||:.||||..:.||:  ...|::.:|  :
Mouse    49 LASINTDFAFSLYKKLALKNPHKNIVFSPLSISAALALMSLGAKDNTLEEILEGLKFNLTETPEA 113

  Fly   166 RLHEQFGLMLQDLQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLN 230
            .:|:.||.:||.|.||..:.                            :::..|.||......:.
Mouse   114 DIHQNFGHLLQMLIQPENQV----------------------------QINAGNALFIDKHLQIL 150

  Fly   231 PDYRRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIASDIPQTTRMILANALYF 295
            .:::.....:|.::....||: .|..|...||.||.:.|:..|:.:: ||:.:.|.|.|.|.|.|
Mouse   151 TEFKEKARALYKAEAFTADFQ-LPREATKLINDYVRKQTQGKIKELV-SDLHRNTSMALVNFLNF 213

  Fly   296 KAFWETDFIESATRPDNFYPNGEGT--EPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNLST 358
            :.||...|....|...||..:.:.|  .|:|:.:.:.|.    |..|.|:...::.|.|.||.|.
Mouse   214 QGFWNVTFDPEDTFLGNFTLDRKRTVNVPMMKTEELTTN----YFRDEEMQSTVMELNYIGNASF 274

  Fly   359 MYIIQPFKSSVRELMALQKRLTADKIESMISRMYRRAAL------VAFPKMHLTESVNLKTVMQR 417
            ::|: |.:..::.:        .|.::....|.:|::..      ::.||..|::..||..::..
Mouse   275 LFIL-PDQGRIQHV--------EDSLQPQSLRKWRKSLRPRMLDELSLPKFSLSQDYNLNDILPE 330

  Fly   418 MGLGGIFSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVN 482
            :|:..:|| .|.|||                           |..||: ::.|..::|:....|.
Mouse   331 LGIKEVFS-TQADLS---------------------------GITGAK-NIRVSQMIHQAALDVT 366

  Fly   483 EQGTEAAASSVTYLKKSGPDV---LFRGDTPFMVLVRHDPTKLVLFYGLINEP 532
            |..|||...::.........:   :.:.|..|:.|:.....|.:...|.:..|
Mouse   367 ETHTEADVITIARYNFQSAKIKAKIVKVDREFLYLILDPMFKSISVMGKVINP 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 101/433 (23%)
Serpina3aNP_001161177.1 SERPIN 53..416 CDD:294093 102/434 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D491891at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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