DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and LOC690319

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:XP_038969283.1 Gene:LOC690319 / 690319 RGDID:1597369 Length:417 Species:Rattus norvegicus


Alignment Length:411 Identity:88/411 - (21%)
Similarity:169/411 - (41%) Gaps:78/411 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 IYSPLSIVHSLALLLLGAKGRSYEEL--STVFDIPDTSR--LHEQFGLMLQDLQQPTREAISAGR 190
            ::|||||:.|..:|.||||..:::::  ...|::.:|..  :||.|..:...|..|..       
  Rat    73 LFSPLSIIASSLMLSLGAKNNTHDQILEGLNFNLTETPENFIHECFQQLTYILHLPDH------- 130

  Fly   191 PLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPDYRRVIVEVYASDLQIQDFEGSPA 255
                                 ..::.:.:.|||.....|...:...:..:|.|.:...:|:.: .
  Rat   131 ---------------------TPQLTMDSSLFTDQKLKLMDKFVEDVRRLYHSKVIALNFKDT-Q 173

  Fly   256 TARYNINAYVAQHTKNHIENIIASDIPQTTRMILANALYFKAFWETDF-IESATRPDNFYPNGEG 319
            .|:..||.||...|...|..:: .::...|...|.|.::|:..|..|| :|.....| |:.|.:.
  Rat   174 RAQNQINEYVEGETHGKIGGLV-KEMEADTDFALMNYIFFQGKWYDDFEVERIVEQD-FHVNSDT 236

  Fly   320 TEPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNLSTMYIIQPFKSSVRELMALQKRLTADKI 384
            |   ::|.|:...|.:..:.|.:|.|.::...|.|: :|.:.:.|.:..|:|   |:|.|.....
  Rat   237 T---VKVPMIHRRGRFFLYRDLDLSCWVMVQHYMGD-ATAFFMLPDQGKVQE---LEKTLNQRHF 294

  Fly   385 ESMISRMYRRAALVAFPKMHLTESVNLKTVMQRMGLGGIFSAVQNDLSLIATNEATRTNALGGNS 449
            |:::..:..|.|.:.||::.:..:.:|||::..:|:..:||                        
  Rat   295 ENILQLIDIRTADLYFPRLSIATTYDLKTILSTLGITEVFS------------------------ 335

  Fly   450 LQNLEAQRRAGTGGARSD--LVVDDIVHKVDFTVNEQGTEAAASSVTYLKKSGP-DVLFRGDTPF 511
                   :.|...|...|  |.:...|||...|..:..| ....:.::.|:..| :.....:.||
  Rat   336 -------KEADLSGVTQDAPLKLGKAVHKTVLTFEDDVT-VPTRNTSWSKRDSPQNFSIHFNRPF 392

  Fly   512 MVLVRHDPTKLVLFYGLINEP 532
            :.:::.:.|...||.|.:..|
  Rat   393 LFVIKDEYTNCPLFVGKVVNP 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 86/404 (21%)
LOC690319XP_038969283.1 serpinA2_PIL 51..413 CDD:381018 87/409 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D491891at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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