DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28Dc and Serpini2

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_080736.2 Gene:Serpini2 / 67931 MGIID:1915181 Length:405 Species:Mus musculus


Alignment Length:448 Identity:102/448 - (22%)
Similarity:196/448 - (43%) Gaps:78/448 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 YSNGYVDLATSDRIANSVLNFANILGQHLANGKTQIYSPLSIVHSLALLLLGAKGRSYEELSTVF 159
            :|......||..:||:..::....:.  |::....|:|||.....|.::.|||||::.:::....
Mouse    13 FSGSQTSRATDQKIADFAVDLYKAIS--LSHKNNIIFSPLGTTMLLGMVQLGAKGKAQQQILKTL 75

  Fly   160 DIPDTSRLHEQFGLMLQDLQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQ 224
            .:..|                |..|..|..:.|     .||:...::     ....:||:.|:.|
Mouse    76 RMRGT----------------PAGEEFSVLKSL-----FSAISKKKQ-----EFTFNLASALYLQ 114

  Fly   225 TGYTLNPDYRRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIA-SDIPQTTRMI 288
            .|:.:...|.....|.:.|..::.||..:..:|: .|:.:|...|...|:|:.: .:....||::
Mouse   115 EGFIVKETYLHSNKEFFQSATKLVDFLDAKTSAQ-AISTWVESKTDGKIKNMFSEEEFGPLTRLV 178

  Fly   289 LANALYFKAFWETDFIESATRPDNFYPNGEGT--EPVMRVQMMATGGAYPYHEDHELGCKIIGLP 351
            |.||:|||..|:..|.:..|...:|......|  .|:|:..:.|   .|.|.....:.|:::.||
Mouse   179 LVNAIYFKGDWKQKFRKEDTEMTDFTKKDGSTVKVPMMKALLRA---QYGYFSQSSMTCQVLELP 240

  Fly   352 YRGNLSTMYIIQPFK-SSVRELMALQKRLTADKIESMISRMYRRAALVAFPKMHLTESVNLKTVM 415
            |:.:..::.||.|.: :|:.|   ::.::||..:....|.::.....|:.|:..:.:.::||..:
Mouse   241 YKADEFSLVIILPTEDTSIEE---VENQVTAPHVRRWFSELHEEEVEVSLPRFKIEQKLDLKEAL 302

  Fly   416 QRMGLGGIFSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFT 480
            ..:.:..|||                    ||..|..:...         |::.|..::.||.|.
Mouse   303 YSLNVTEIFS--------------------GGCDLSGITDS---------SEVYVSRVMQKVFFE 338

  Fly   481 VNEQGTEAAASSVTYLKKSGPDVL------FRGDTPFMVLVRHDPTKLVLFYGLINEP 532
            :||.|:|||||:...:    |.::      |..:.||:.:::|..|:.:||.|.:.:|
Mouse   339 INEDGSEAAASTGINI----PAIMSLTQTQFLANHPFLFILKHIRTESILFMGKVTDP 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 95/425 (22%)
Serpini2NP_080736.2 neuroserpin 23..405 CDD:239003 99/438 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.