DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Serpina5

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001231668.1 Gene:Serpina5 / 65051 RGDID:619817 Length:442 Species:Rattus norvegicus


Alignment Length:429 Identity:106/429 - (24%)
Similarity:189/429 - (44%) Gaps:78/429 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 NFANILGQHLAN---GKTQIYSPLSIVHSLALLLLGA----KGRSYEELSTVFDIPDTSRLHEQF 171
            :||..|.:.||:   |:...:||:|:..||.:|.||:    |.:..|.|...........||:.|
  Rat    82 DFAFRLYRALASEAPGQNVFFSPMSVSMSLGMLSLGSGLKTKAQILEGLGLSLQQGQEDMLHKGF 146

  Fly   172 GLMLQDLQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPDYRRV 236
            ..:||...||     |.|..|:                       |.:.|||.....:...:...
  Rat   147 QQLLQQFSQP-----SDGLQLS-----------------------LGSALFTDPAVHIRDHFLSA 183

  Fly   237 IVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIASDIPQTTRMILANALYFKAFWET 301
            :..:|.||:...:| |:|.:|:..||.|||:.|...|.::| .|:..|..|::.|.::|||.|:|
  Rat   184 MKTLYMSDMFSTNF-GNPESAKKQINDYVAKKTNGKIVDLI-KDLDSTHVMVVVNYIFFKAKWQT 246

  Fly   302 DFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNLSTMYIIQPFK 366
            .|..:.|...:::...:.|   ::|.||.....|.|..|..:.|.::|:||:||...::|:    
  Rat   247 AFSSTNTHKMDYHVTPKKT---IQVPMMNREDIYSYILDQNISCTVVGIPYQGNTFALFIL---- 304

  Fly   367 SSVRELMALQKRLTADKIESMISRMYRRAALVAFPKMHLTESVNLKTVMQRMGLGGIFSAVQNDL 431
            .|..::..::..|....:.:.:....:|...:..||..:..:..|:.::.::|:..||: ...||
  Rat   305 PSEGKMKRVEDGLDERTLRNWLKMFTKRQLDLYLPKFSIEGTYKLEKILPKLGIQDIFT-THADL 368

  Fly   432 SLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNEQGTEAAASS--VT 494
            |.:..:                            :::.:.::|||....|:|.||.||||:  :.
  Rat   369 SGLTDH----------------------------TNIKLSEMVHKSMVEVDESGTTAAASTGILF 405

  Fly   495 YLKKSGPDVL-FRGDTPFMVLVRHDPTKLVLFYGLINEP 532
            .|:.:.|..| .....||:|::. |.|.| .|.|.:.:|
  Rat   406 TLRSARPSSLKVEFTRPFLVVIM-DGTNL-YFIGKVIQP 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 104/422 (25%)
Serpina5NP_001231668.1 alpha-1-antitrypsin_like 81..439 CDD:239011 105/424 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D491891at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.110

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