DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28Dc and SERPINB3

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_008850.1 Gene:SERPINB3 / 6317 HGNCID:10569 Length:390 Species:Homo sapiens


Alignment Length:424 Identity:111/424 - (26%)
Similarity:189/424 - (44%) Gaps:84/424 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 YSPLSIVHSLALLLLGAKGRSYEELSTV--FD--------------IPDTSRLHEQFGLMLQDLQ 179
            |||:||..:|.::|||||..:.:::..|  ||              :..:..:|.||..:|.:..
Human    29 YSPISITSALGMVLLGAKDNTAQQIKKVLHFDQVTENTTGKAATYHVDRSGNVHHQFQKLLTEFN 93

  Fly   180 QPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPDYRRVIVEVYASD 244
            :.|                            .|:|:.:||.||.:..|....:|...|.:.|.:.
Human    94 KST----------------------------DAYELKIANKLFGEKTYLFLQEYLDAIKKFYQTS 130

  Fly   245 LQIQDFEGSPATARYNINAYVAQHTKNHIENII-ASDIPQTTRMILANALYFKAFWETDFIESAT 308
            ::..||..:|..:|..||::|...|...|:|:| ..:|...|.::|.||:|||..||..|.:..|
Human   131 VESVDFANAPEESRKKINSWVESQTNEKIKNLIPEGNIGSNTTLVLVNAIYFKGQWEKKFNKEDT 195

  Fly   309 RPDNFYPNGEGTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNLSTMYIIQPFKSSVRELM 373
            :.:.|:||   ......:|||....::.:....::..|::.:||:|...:|.::.|  :.:..|.
Human   196 KEEKFWPN---KNTYKSIQMMRQYTSFHFASLEDVQAKVLEIPYKGKDLSMIVLLP--NEIDGLQ 255

  Fly   374 ALQKRLTADKIESMISRMYRRAALV--AFPKMHLTESVNLKTVMQRMGLGGIFSAVQNDLSLIAT 436
            .|:::|||:|:....|....|...|  ..|:..:.||.:||..::.||:..||:. ..|||    
Human   256 KLEEKLTAEKLMEWTSLQNMRETRVDLHLPRFKVEESYDLKDTLRTMGMVDIFNG-DADLS---- 315

  Fly   437 NEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNEQGTEAAASSVTYLKKSGP 501
                                   |..|:|. ||:..::||....|.|:|.||||::......|.|
Human   316 -----------------------GMTGSRG-LVLSGVLHKAFVEVTEEGAEAAAATAVVGFGSSP 356

  Fly   502 ---DVLFRGDTPFMVLVRHDPTKLVLFYGLINEP 532
               :..|..:.||:..:|.:.|..:||||..:.|
Human   357 TSTNEEFHCNHPFLFFIRQNKTNSILFYGRFSSP 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 108/417 (26%)
SERPINB3NP_008850.1 serpinB3_B4_SCCA1_2 1..390 CDD:381030 110/422 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.