DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and serpina3

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001011275.1 Gene:serpina3 / 496728 XenbaseID:XB-GENE-5933441 Length:414 Species:Xenopus tropicalis


Alignment Length:457 Identity:114/457 - (24%)
Similarity:198/457 - (43%) Gaps:90/457 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 YSNGYVDLATSDRIANSVLNFANI-----LGQHLANGKTQ----------IYSPLSIVHSLALLL 144
            ::||:    ...:||...|..|||     |.:||.. |||          ::|||||:.:.::||
 Frog    26 HANGH----AGGKIAQEALGSANIDFALNLYKHLVT-KTQAEKESTQKNIVFSPLSILTAFSMLL 85

  Fly   145 LGAKGRSYEELSTVFDIPDT----SRLHEQFGLMLQDLQQPTREAISAGRPLTDWRASSAMRSNR 205
            ||||..|::::.:...:..|    ..:||.|..:||.|.:|..:.                    
 Frog    86 LGAKSESHQQILSGLSLNQTQVPEEDMHEAFEHLLQVLNRPKSDL-------------------- 130

  Fly   206 RAQRPGAHEVHLANGLFTQTGYTLNPDYRRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTK 270
                    :|.:.|.:|.:....:...:.:.|...|.:::....|: :||.|...||.:|...|:
 Frog   131 --------QVKIGNAVFVEDTLKILDSFVQEIEHHYHAEIFPSHFK-NPAEAEKQINDFVNNKTE 186

  Fly   271 NHIENIIASDIPQTTRMILANALYFKAFWETDFIESATRPDNFYPNGEGTEPVMRVQMMATGGAY 335
            ..|:.:: .|:.:.|::::.|.:.|.|.|:..|....|....|..:...|   :.||||:....|
 Frog   187 GRIQELV-KDLSEATKLVVINFILFNAEWQNPFSSFFTHSRQFSVDENTT---VEVQMMSKTDLY 247

  Fly   336 PYHEDHELGCKIIGLPYRGNLSTMYIIQPFKSSVRELMALQKRLTADKIESMISRMYRRAALVAF 400
            .:::|.::.|.::.|||:.|.| |.||.|....:.|   :::.|:.:.::...|...:....:..
 Frog   248 QFYKDEKIPCSVLQLPYKNNAS-MLIIVPELGKIHE---VEEALSVETLKRWTSSAEKSFFELFL 308

  Fly   401 PKMHLTESVNLKTVMQRMGLGGIFSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGAR 465
            ||..::.|:.||.::..||:|.||:... |.|.|:.|                            
 Frog   309 PKFSISSSLKLKDILTDMGMGIIFTDAA-DFSGISEN---------------------------- 344

  Fly   466 SDLVVDDIVHKVDFTVNEQGTEAAASSVTYLKKSGPDVLFRGDTPFMVLVRHDPTKLVLFYGLIN 530
            |.|.:..:|||....|.|.||||||:|......:...|.|..|.||:.|:.......:||...:.
 Frog   345 SRLKLSKVVHKAVLNVAENGTEAAAASAVEGVLTSLMVQFVVDKPFITLICSQEPYSILFMSRVI 409

  Fly   531 EP 532
            :|
 Frog   410 DP 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 109/434 (25%)
serpina3NP_001011275.1 serpinA 43..411 CDD:381073 108/434 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D491891at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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