DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and serpina3k

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:XP_002936116.2 Gene:serpina3k / 496632 XenbaseID:XB-GENE-6453500 Length:432 Species:Xenopus tropicalis


Alignment Length:435 Identity:104/435 - (23%)
Similarity:188/435 - (43%) Gaps:77/435 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 RIANSVLNFA-NILGQHLANGKTQ--IYSPLSIVHSLALLLLGAKGRSYEEL--STVFDIPDTS- 165
            :||....||. ::..|..|:..|:  ..||:||....|:|.|||:..:..::  ...|:..:.: 
 Frog    64 KIAPYNANFGFSLYRQIAADHPTENIFISPVSISTVFAMLSLGARSNTLNQIIEGLKFNRSELTE 128

  Fly   166 -RLHEQFGLMLQDLQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTL 229
             .:|:.|..:|..|..|                      |.:.|      ::..|.||......|
 Frog   129 EEMHKGFQHLLHMLNDP----------------------NSKVQ------LNSGNALFIDKDLQL 165

  Fly   230 NPDYRRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIASDIPQTTRMILANALY 294
            ...:.....:.|.::....||..:....: .||.|....||..|.::|:| :.:.|.::|.|.:|
 Frog   166 IQKFVEDSKQFYEAETFSTDFHNTEEATK-QINTYAENKTKGKITDLISS-VDEKTILVLINYIY 228

  Fly   295 FKAFWETDFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNLSTM 359
            |...||..|.:..|: |..:...|.|.  :.|.||...|.|....|.:|||.::.:||:||.:.:
 Frog   229 FYGEWEKHFEKEWTK-DGIFHVDENTN--VTVPMMHRNGMYNVAFDEKLGCTVVQIPYKGNATAL 290

  Fly   360 YIIQPFKSSVREL-MALQKRLTADKIESMISRMYRRAALVAFPKMHLTESVNLKTVMQRMGLGGI 423
            :|: |.:..:|:: .||:|.:    ::|......:|...:..||:.::.:.:|...:.::|:..:
 Frog   291 FIL-PDEGKLRQVEEALEKAV----VKSWKKLFRKRFVHLTLPKLSISATTDLVKELSKLGVTDV 350

  Fly   424 FSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNEQGTEA 488
            ||. .:|||.|.  :.|                          .|.|...||||..:::|.||||
 Frog   351 FSD-NSDLSGIV--DVT--------------------------PLKVSKAVHKVLVSIDETGTEA 386

  Fly   489 AASSVTYLKKSGPDVLFRGDTPFMVLVRHDPT-KLVLFYGLINEP 532
            |..:|..:..:........:.||:::: ::|| :..||.|.:..|
 Frog   387 AGVTVMEIVPTMLPPRIEYNRPFVLMI-YEPTLRANLFMGRVMNP 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 100/424 (24%)
serpina3kXP_002936116.2 serpin 62..431 CDD:393296 104/435 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D491891at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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