DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and nec

DIOPT Version :10

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_524851.1 Gene:nec / 45908 FlyBaseID:FBgn0002930 Length:476 Species:Drosophila melanogaster


Alignment Length:563 Identity:124/563 - (22%)
Similarity:219/563 - (38%) Gaps:137/563 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLLVSSVCCESELFRDDLRTPETMAYINGLMQRRHQMQQ------------EAQQHIQAIPPAVP 60
            |||::.....::.|..:|     :|:     ||:.|.||            :.|||.:...|.:.
  Fly     8 LLLLTVHLLAAQTFAQEL-----IAW-----QRQQQQQQQQQLQLQQQLLLQQQQHQRNPRPELG 62

  Fly    61 LQS-PGLVNGLGNQNDPALNRISGTSV--------KPSNLPAAYSNGYVDLATSDRIANSVLNFA 116
            |:| ||  |.....|..|::.:....:        .|:..|..:|  |:|            .|:
  Fly    63 LRSLPG--NPWTQNNQEAISDVVAVDLTKREPVTPPPNRPPPVFS--YMD------------RFS 111

  Fly   117 NILGQHLANGKTQ---IYSPLSIVHSLALLLLGAK-GRSYEELSTVFDIPDTSRLHEQFGLMLQD 177
            :.|.:.:...::|   ::||.| ||:|..|:.||. |:::.||....:....:.      .:.||
  Fly   112 SELFKEIIKSQSQQNVVFSPFS-VHALLALIYGASDGKTFRELQKAGEFSKNAM------AVAQD 169

  Fly   178 LQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANG---LFTQTGYT-----LNPDYR 234
            .:...:                             ::.||...   |.|:..|.     :|..|.
  Fly   170 FESVIK-----------------------------YKKHLEGADLTLATKVYYNRELGGVNHSYD 205

  Fly   235 RVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIA-SDIPQTTRMILANALYFKAF 298
            ......:::..:..|.:.:..||. .|||:|...|:|.|.:::. :|:...|:.:|.||:||:..
  Fly   206 EYAKFYFSAGTEAVDMQNAKDTAA-KINAWVMDTTRNKIRDLVTPTDVDPQTQALLVNAVYFQGR 269

  Fly   299 WETDFIESATRPDNF-YPNGEGTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNLSTMYII 362
            ||.:|....|.|.:| :.||.    :.:|.||.....|...|..|||...:.|.|:.:.::|.|:
  Fly   270 WEHEFATMDTSPYDFQHTNGR----ISKVAMMFNDDVYGLAELPELGATALELAYKDSATSMLIL 330

  Fly   363 QPFKSSVRELMALQKRLTADKIESMISRMYRRAALVAFPKMHLTESVNLKTVMQRMGLGGIFSAV 427
            .|.:::....|..|.......:..:..|:.|::..|..||.......::...::.:|:..:|:..
  Fly   331 LPNETTGLGKMLQQLSRPEFDLNRVAHRLRRQSVAVRLPKFQFEFEQDMTEPLKNLGVHQMFTPN 395

  Fly   428 QNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNEQGTEA-AAS 491
            .....|:  ::..|                            |..|:.|....|.|.|||| |||
  Fly   396 SQVTKLM--DQPVR----------------------------VSKILQKAYINVGEAGTEASAAS 430

  Fly   492 SVTYLKKSGP--DVLFRGDTPFMVLVRHDPTKLVLFYGLINEP 532
            ...::..|.|  ...|..:.||:..||...:  |||.|.:..|
  Fly   431 YAKFVPLSLPPKPTEFVANRPFVFAVRTPAS--VLFIGHVEYP 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 serpin28D-like_insects 111..532 CDD:381061 96/437 (22%)
necNP_524851.1 serpin42Dd-like_insects 105..471 CDD:381070 99/452 (22%)

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