DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Spn43Aa

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_524805.1 Gene:Spn43Aa / 45041 FlyBaseID:FBgn0024294 Length:390 Species:Drosophila melanogaster


Alignment Length:454 Identity:114/454 - (25%)
Similarity:172/454 - (37%) Gaps:102/454 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 GLGNQNDPALNRISGTSVKPSNLPAAYSNGYVDLATSDRIANSVLNFANILGQHLANGKTQ---I 130
            ||||            ::|..||                       ||..|.|.||..:..   |
  Fly    19 GLGN------------TIKDRNL-----------------------FATELFQTLATDRQDENVI 48

  Fly   131 YSPLSIVHSLALLLLGAKGRSYEELSTVFDIPDTSRLHEQFGLMLQDLQQPTREAISAGRPLTDW 195
            .||:||..:|.|...||:||:..||....   ..|....:.||           |.|....|..:
  Fly    49 ISPVSIQLALGLAYYGAEGRTAAELQKTL---HASAKESKDGL-----------AESYHNLLHSY 99

  Fly   196 RASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPDYRRVIVEVYASDLQIQDFEGSPATARYN 260
            ..|..:             :.:||.::|:...|::..:|.|..:.:.|:::..|| .....|...
  Fly   100 IKSKTV-------------LEIANKVYTRQNLTVSSHFREVAQKYFDSEVEPLDF-SRETEAVEQ 150

  Fly   261 INAYVAQHTKNHIENIIASDIPQTTRMILANALYFKAFWETDFIESATRPDNFYPNGEGTEPVMR 325
            ||.:|.|.|:|.||.::.|..|. |.:.|.||:||||.|...|.:..||...|:.:...:   ::
  Fly   151 INRWVKQQTENKIERVVESLEPD-TNVALVNAIYFKARWARPFNDEDTRDREFWLSESRS---IQ 211

  Fly   326 VQMMATGGAYPYHEDHELGCKIIGLPYRGNLSTMYIIQPFKSSVRELMALQKRLTADKIESMISR 390
            |..|.....|.|.:..||..|.|.|.:.....||:.|.|.:.|  .|.||:::|.......:..|
  Fly   212 VPTMFADNWYYYADYPELDAKAIELFFENINLTMWFILPNQRS--GLQALEQKLKGVDFNLLEDR 274

  Fly   391 MYRRAALVAFPKMHLTESVNLKTVMQRMGLGGIFSAVQNDLSLIATNEATRTNALGGNSLQNLEA 455
            ...::..|..||.......:|:..:.:||:..:||...:                    ..|:..
  Fly   275 WQWQSVSVYLPKFKFEFDTDLRPTLHKMGISAMFSDAAD--------------------FSNIFQ 319

  Fly   456 QRRAGTGGARSDLVVDDIVHKVDFTVNEQGTEAA-ASSVTYLKKSGP--DVLFRGDTPFMVLVR 516
            ....||.       :..:.||....|||.|.||| ||....:..|.|  ...|..|.||..::|
  Fly   320 DSPIGTR-------ITKVQHKTFIDVNEIGCEAAGASYAAGVPMSLPLDPKTFVADHPFAFIIR 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 107/412 (26%)
Spn43AaNP_524805.1 SERPIN 28..387 CDD:238101 109/433 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
33.010

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