DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Spn77Bc

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001262103.1 Gene:Spn77Bc / 40236 FlyBaseID:FBgn0036970 Length:416 Species:Drosophila melanogaster


Alignment Length:462 Identity:101/462 - (21%)
Similarity:164/462 - (35%) Gaps:134/462 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 LNFANILGQHLANGKTQIYSPLSIVHSLALLLLGAKGRSYEELSTVF----DIPDTSRLHEQFGL 173
            ||...:...|| |.:....:|.|....:.:...||:|.:.:::..|.    |.|...|.:|    
  Fly    42 LNLLQMESTHL-NLENFAMTPFSTWSLMIMFYEGAEGTTLKQIRDVLAIYVDYPTLRRWYE---- 101

  Fly   174 MLQDLQQPTREAISAGRPLTDWRA-------SSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNP 231
                                |.||       ::.:.|.|.|......::.|..|           
  Fly   102 --------------------DVRAYHYLNSENTKLFSLRYAYYDDVGDLELVKG----------- 135

  Fly   232 DYRRVIVE-VYASDLQIQDFEGSPATARYNINAYV--------AQHTKNHIENIIAS----DIPQ 283
             |..|::| |...::.::  ||.|....::..|.:        |.|.|     |.:|    ....
  Fly   136 -YNSVVLEGVGEGNVVLR--EGRPRGVDFDQGASIIINDDIDKASHAK-----IFSSYSRRSFNS 192

  Fly   284 TTRMILANALYFKAFWETDFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPYHEDHE-LGCKI 347
            |..::.....||||.|:..|.:|.|:.:.||  ..|..|..:|:||...|.|.|..:.: |...:
  Fly   193 TVTVLGITVSYFKAKWKYPFDKSQTKVEQFY--NAGGSPAGKVEMMVQTGKYAYVNNVKGLQADV 255

  Fly   348 IGLPYRGNLSTMYIIQPFKSSVRELMALQ-----------KRLTADKIESMISRMYRRAALVAFP 401
            :.||:..:...|.:|.| |.|.|..:.|:           :.|.|.|.||.:.        |..|
  Fly   256 LELPFGEHELVMIVILP-KPSQRVSLVLKQLKNLGLHRLLEELEASKNESDVE--------VKLP 311

  Fly   402 KMHLTESVNLKTVMQRMGLGGIFSAVQNDLS-----LIATNEATRTNALGGNSLQNLEAQRRAGT 461
            |......::|:..:...||    :.::|:.:     ||.|                       |.
  Fly   312 KFDTRSVLSLEDTVYEAGL----TDLRNEFADLGRMLIPT-----------------------GD 349

  Fly   462 GGARSDLVVDDIVHK-VDFTVNEQGTEAAASSVTYLKKSGP-DVLFRGDTPFMVLVRHDPTKLVL 524
            .||...|     .|: ....|:|:|...|...    |.||. ::.|..:.||..||.....||::
  Fly   350 RGAYLSL-----YHQFARIVVDEEGLPNAVPQ----KSSGTNNIKFHINRPFAYLVLQRTHKLLI 405

  Fly   525 FYGLINE 531
            ..|:..|
  Fly   406 HSGVFRE 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 99/456 (22%)
Spn77BcNP_001262103.1 SERPIN 36..410 CDD:238101 100/458 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
22.100

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