DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Serpina11

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001008776.1 Gene:Serpina11 / 362774 RGDID:1359239 Length:462 Species:Rattus norvegicus


Alignment Length:517 Identity:109/517 - (21%)
Similarity:205/517 - (39%) Gaps:134/517 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 GNQNDPALNRISGTSVKPSNLPAAYSNGYVDLATSDRIANSVLNFANILGQHLAN---GKTQIYS 132
            |:::..|....|..|::|:  ||.:           ::..::.|||..|.:.||.   |.. ::|
  Rat    26 GDKSLGAPQPASHQSLEPA--PAYH-----------KVTPTITNFALRLYKQLAEEIPGNI-LFS 76

  Fly   133 PLSIVHSLALLLLGAKGRSYEEL--STVFDIPDT--SRLHEQFGLMLQDLQQPTREAISAGRPLT 193
            |:|:..::|||.|||...:..::  |..|::.:|  :.:|..|..:|..|..|:.:.        
  Rat    77 PVSLSSTVALLSLGAHADTQAQILQSLGFNLTETPAADIHRGFQSLLHTLDLPSPKL-------- 133

  Fly   194 DWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPDYRRV--IVEVYASDLQIQDFEGSPAT 256
                                |:.|.:.||...  .|.|..|.:  ..|:|.:.....:|..:.||
  Rat   134 --------------------ELKLGHSLFLDR--QLKPQQRFLDSAKELYGALAFSANFTEAAAT 176

  Fly   257 ARYNINAYVAQHTKNHIENIIASDIPQTTRMILANALYFKAFWETDFIESATR-PDNFYPNGEGT 320
            .: .||..|.:.|...:...: .:..:.|.|:|.|.::|||.|:..|....|| .::|:.:   .
  Rat   177 GQ-QINDLVRKQTYGQVVGCL-PEFDRDTLMVLLNYIFFKAKWKHPFDRYQTRKQESFFVD---Q 236

  Fly   321 EPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNLSTMYIIQPFKSSVRELMA----------- 374
            ...:|:.||.....:.:..|.|..|.::.:.|.|. :.:.::.|....::::.|           
  Rat   237 RLQLRIPMMRQKEMHRFLYDQEASCTVLQIEYSGT-ALLLLVLPDPGKMQQVEAALQPETLRRWG 300

  Fly   375 ---LQKRLTA----------DKIESMISRMYRRAAL-------------VAFPKMHLTESVNLKT 413
               |.::..|          |::.........:.:|             :..|:..::.:.||:.
  Rat   301 QRFLPRKAQAGGAGNGGLHWDRVNEFPQNRVGKLSLKHLQMTQTWSLLDLHLPRFSVSATYNLEE 365

  Fly   414 VMQRMGLGGIFSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVD 478
            ::..:||..:|. |:.|||.| ..:..:|                           |..:.||..
  Rat   366 ILPLVGLSSLFD-VEADLSGI-MGQLNKT---------------------------VSRVSHKAV 401

  Fly   479 FTVNEQGTEAAASS------VTYLKKSGPDVLFRGDTPFMVLVRHDPTKLVLFYGLINEPPA 534
            ..:||:||||||:|      .:....|.|...|  :.||::|:....|:.:||.|.:..|.|
  Rat   402 VDMNEKGTEAAAASGLLSQPPSLNMTSAPHAHF--NRPFLLLLWEVTTQSLLFLGKVVNPAA 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 99/468 (21%)
Serpina11NP_001008776.1 alpha-1-antitrypsin_like 53..456 CDD:239011 100/470 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D491891at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.110

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