DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Spn47C

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001163116.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster


Alignment Length:440 Identity:99/440 - (22%)
Similarity:187/440 - (42%) Gaps:75/440 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 TSDRIANSVLNFANILGQHLANGK----TQIYSPLSIVHSLALLLLGAKGRSYEELST--VFDIP 162
            |:..::.|.:.||..|.:.| |.:    ..:.||.....::.|:.:||.|:|.:||.:  :..:.
  Fly     7 TAPSLSASPIVFARNLFRAL-NDEVPPVNMMVSPAGARSAMTLVFMGAGGKSADELRSKLILGVS 70

  Fly   163 DTSRLHEQFGLMLQDLQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGY 227
            :.|.:.:|......|.....::.::                           :.|...|:.....
  Fly    71 NKSEVAKQHAESWTDECSCAKKGVA---------------------------LRLVTRLYVNEEE 108

  Fly   228 TLNPDYRRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIASDI-PQTTRMILAN 291
            .:..|:..:.:|.:.::....::. :|..:...:|.::.:||...:.|:...:: ...:.:||.|
  Fly   109 KIRTDFNDMALEFFNAEAYSLNYL-NPEDSVKKVNKWLEKHTFYTVRNLFTPEVFNSDSSVILVN 172

  Fly   292 ALYFKAFWETDFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPY-RGN 355
            :|:|:|.|...|.:..|:.|:|:.|   ....|.|.||...|.:.|.|..:|..:|:.||: |.|
  Fly   173 SLFFRAKWNKIFPQQLTQIDDFWIN---PRQRMEVSMMRQIGQFRYGESKKLKSQILQLPFERSN 234

  Fly   356 LSTMYIIQPFKSSVRELMALQKRLTADKIESMISRMYRRAALVAFPKMHLTESVNLKTVMQRMGL 420
            | ||.||.|  :::..|..|:::|....:..:.::...:...|..||..:..:|:||..:|:||:
  Fly   235 L-TMMIILP--TAIDGLPELEEKLGQLDMNEVAAKSLMKEVDVTIPKFRIECTVDLKVPLQKMGI 296

  Fly   421 GGIFSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNEQG 485
            ..:|.|.|.|||                .|..::..::           :.:..|||...|.|.|
  Fly   297 NSVFDAGQADLS----------------DLFEMKTPQK-----------ISEARHKVFLNVTEFG 334

  Fly   486 TEAAASSVT---YLKKSGPDVLFRGDTPFMVLVRHDPTKLVLFYGLINEP 532
            .|.|..:..   .|||:.....|:.|.||:..:|  ..|.|.|.|...:|
  Fly   335 CEVAPEAEVQPEVLKKNPDRKFFKADRPFVFAIR--DRKNVYFVGHFVKP 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 96/426 (23%)
Spn47CNP_001163116.1 SERPIN 18..379 CDD:238101 96/424 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
33.010

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