DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and serpind1

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_878300.1 Gene:serpind1 / 359841 ZFINID:ZDB-GENE-030711-2 Length:507 Species:Danio rerio


Alignment Length:437 Identity:109/437 - (24%)
Similarity:176/437 - (40%) Gaps:82/437 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 SVLN--FANILGQHLANGKTQ----IYSPLSIVHSLALLLLGAKGRSYEELSTVFDIP------- 162
            :|:|  |...|.:.|.|...|    :.:|:.|..::.::.||....:.|:|.......       
Zfish   135 NVVNARFGFRLYRKLRNRLNQTDNILLAPVGISIAMGMMGLGVGPNTQEQLFQTVGFAEFVNASN 199

  Fly   163 --DTSRLHEQFGLMLQDLQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQT 225
              |.|.:|:.|                  |.||          :|..:|...:.:...|.|:.:.
Zfish   200 HYDNSTVHKLF------------------RKLT----------HRLFRRNFGYTLRSVNDLYVKR 236

  Fly   226 GYTLNPDYRRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIASDIPQTTRMILA 290
            ...:...:|......|.::.|..|| ..||.. ...|..:.:.||..|:..:.|..|....|:| 
Zfish   237 NVQIQDSFRADAKTYYFAEPQSVDF-ADPAFL-VKANQRIQKITKGLIKEPLKSVDPNMAVMLL- 298

  Fly   291 NALYFKAFWETDFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGN 355
            |.||||..||..|.:..|....|..|   .:..:||.||...|:|....||||.|.|:.|||.||
Zfish   299 NYLYFKGTWEQKFPKELTHHRQFRVN---EKKQVRVLMMQNKGSYLAAADHELNCDILQLPYAGN 360

  Fly   356 LSTMYIIQPFKSSVRELMALQKRLTADKIESMISRMYRRAALVAFPKMHLTESVNLKTVMQRMGL 420
            :| |.|..|.|.|  .:.:|::.::...:...:|.|..|...|.||:..|.::.:|...::.||:
Zfish   361 IS-MLIAVPQKLS--GMRSLEQEISPTLVNKWLSNMTNRTREVVFPRFKLEQNYDLIEHLKEMGM 422

  Fly   421 GGIFSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNEQG 485
            ..||:. :.|.|.:.:.:                             ::::...|:...||||:|
Zfish   423 TDIFTE-KGDFSPMTSEK-----------------------------VIINWFKHQGSITVNEEG 457

  Fly   486 TEAAASSVTYLKKSGPDVLFRGDTPFMVLVRHDPTKLVLFYGLINEP 532
            |||||.:............|..|.||:.|:....|..|:|.|.:.:|
Zfish   458 TEAAAMTHIGFMPLSTQTRFIVDRPFLFLIYEHRTGCVVFMGRVVDP 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 107/430 (25%)
serpind1NP_878300.1 HCII 61..505 CDD:239002 109/437 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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