DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Spn42De

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_610246.3 Gene:Spn42De / 35602 FlyBaseID:FBgn0033115 Length:404 Species:Drosophila melanogaster


Alignment Length:436 Identity:111/436 - (25%)
Similarity:192/436 - (44%) Gaps:86/436 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 FANILGQHLA---NGKTQIYSPLSIVHSLALLLLGAKGRSYEELSTVFDIPDTSRLHEQFGLMLQ 176
            ||:.|...||   :|:..::||.||...|||..|||:|.:.:||              :.||.|:
  Fly    35 FASQLFGQLAKSQSGRNIVFSPSSIRTGLALAYLGAEGSTADEL--------------KLGLGLE 85

  Fly   177 -----DLQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEV---HLANGLFTQTGYTLNPDY 233
                 ::.:...:.::.|:    |..:|           |..:|   ..||.:|....:.|...|
  Fly    86 GAGKTEVAEKLDQLLAKGQ----WEKAS-----------GDEDVPKLKYANRIFVTQRFKLTQTY 135

  Fly   234 RRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIASD-IPQTTRMILANALYFKA 297
            :.::.:.:|:..:..:|.....||:: ||::|.:.|...|:::||.: :...|..||.||:||||
  Fly   136 QDLVSKNFAAAAENVNFTQKADTAKH-INSWVEEQTHQQIKDLIAPESLDADTSAILVNAIYFKA 199

  Fly   298 FWETDFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNLSTMYII 362
            .|::.|.:.||...:|..:| |.:  :.|..|:....:.:.|..||..|::.|||.|......||
  Fly   200 DWQSSFPDYATYASDFVNHG-GRK--VSVDTMSQEDYFRFGELTELKAKVVELPYTGTDIVFLII 261

  Fly   363 QPFKSSVRELMALQKRLTADKIESMISRMYRRAALVAFPKMHLTESVNLKTVMQRMGLGGIFSAV 427
            .|  ...:.|..::::|....:..:.|::.||...|..||......|.|:..::.:|:..:||..
  Fly   262 LP--QEEQGLAIVEEKLMGIDLNEISSQLRRRKVRVQLPKFKFEFDVPLQAALEELGIKKLFSPG 324

  Fly   428 QNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNEQGTEAAASS 492
            .|..||...:|..|                            :.::.||....|||:||  .||.
  Fly   325 ANLSSLYQGSEPLR----------------------------ISEVKHKAIIEVNEKGT--TASG 359

  Fly   493 VTYLKKS------GPDVL-FRGDTPFMVLVRHDPTKLVLFYGLINE 531
            .|::|.|      |.:|. |..|.||...::  ..:..||.|.:::
  Fly   360 ATFIKVSVESLTIGEEVFEFIADHPFFFAIK--DAQNTLFLGHVSQ 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 110/430 (26%)
Spn42DeNP_610246.3 SERPIN 31..401 CDD:238101 111/432 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
33.010

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