DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Spn42Db

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_610244.2 Gene:Spn42Db / 35599 FlyBaseID:FBgn0033112 Length:388 Species:Drosophila melanogaster


Alignment Length:446 Identity:117/446 - (26%)
Similarity:177/446 - (39%) Gaps:102/446 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 DRIANSVLNFANILGQHLAN---GKTQIYSPLSIVHSLALLLLG-----AKGRSYEELSTVFDIP 162
            :..|..:..||..|..||..   |...|||||||..|.|:|.:|     |..:..:| ...|...
  Fly     4 EEFAQGLEQFALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSEGSATAKEMDE-GLRFGGL 67

  Fly   163 DTSRLHEQFGLMLQDLQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGY 227
            :..::.|.||::|:..:|                               ...:.:||||:...|.
  Fly    68 EAQQVAESFGVVLKSYEQ-------------------------------CQVLKMANGLYVMKGL 101

  Fly   228 TLNPDYRRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIASDI-PQTTRMILAN 291
            .::..:..::.:.:.|.....|| ||...|.. ||.:|...|.|.|::||...: .:.:|:.|.|
  Fly   102 QVDEQFGHILEQKFRSKPMEIDF-GSEQAASI-INKWVESQTNNLIKDIIGPRVLTKDSRLCLVN 164

  Fly   292 ALYFKAFWETDFIESATRPDNFYPNGEGTEPVMRVQMMAT-----GGAYPYHEDHELGCKIIGLP 351
            .::||..|...|.|..||.::|:    |::...||:||..     ....|..|...|        
  Fly   165 GIHFKGEWSISFNEKETREEDFF----GSDRPTRVRMMHVCENFFFAVLPMFEATAL-------- 217

  Fly   352 YRGNLS----TMYIIQPFKSSVRELMALQKRLTADKIESMISRMYRRAALVAFPKMHLTESVNLK 412
             |.|.|    .|.|:.|.:.|  .|.:|:|:|:...:|.:.|.|......|..|.........|.
  Fly   218 -RMNYSACNLAMIILLPDEKS--NLTSLEKKLSDISLEVVSSAMNLEKVDVKIPSFTAEFQQELS 279

  Fly   413 TVMQRMGLGGIFSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKV 477
            .|:..||:..|||. |.:|               |..||:.|:            |.|..||||.
  Fly   280 QVLMLMGMNRIFSG-QAEL---------------GGMLQSEES------------LFVSQIVHKA 316

  Fly   478 DFTVNEQGTEAAASSVTYL------KKSGPDVLFRGDTPFMVLVRHDPTKLVLFYG 527
            ...:||.||||||::....      .:.||..:|..:.||...:: |.|..:||.|
  Fly   317 FIEINEVGTEAAAATAAVATFRSMPARQGPPKVFHANRPFFYAIK-DNTHGLLFAG 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 115/439 (26%)
Spn42DbNP_610244.2 SERPIN 12..373 CDD:238101 116/438 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
33.010

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