DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and CG43366

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_610188.2 Gene:CG43366 / 35519 FlyBaseID:FBgn0263109 Length:2140 Species:Drosophila melanogaster


Alignment Length:629 Identity:121/629 - (19%)
Similarity:208/629 - (33%) Gaps:215/629 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 DLRTPETMAYINGLMQRRHQMQQEAQQHIQAIPPAVPLQSPGLVN-GLGNQNDPALNRISGTSVK 87
            |::.|:.:.| |.......|:|             ||:.|..::| ...:|..|.|..:..:|.:
  Fly  1600 DMQPPKVLPY-NANKADPVQLQ-------------VPIHSQSMLNQQRPSQRPPLLINLMASSTQ 1650

  Fly    88 PSNLPAAY------SNGY--------VDLATSDRIANSVLNFA---NILGQHLANGKTQIYSPLS 135
            .:..|...      |.|.        .||.:..|:.|. |.|:   .|..:.:::.::.:.||.:
  Fly  1651 STRPPVKLDPSPESSQGLEASTAMMDEDLQSFARLCNE-LAFSYWRAITSEKISSARSLVISPFA 1714

  Fly   136 IVHSLALLLLGAKGRSYEELSTVFDIPD--TSRLHEQFGLMLQDLQQPTREAISAGRPLTDWRAS 198
            :...|:::.|||:|.:..|::.:..:.|  |...|..|..:...::|.:...|          |:
  Fly  1715 LTSMLSMVFLGARGSTSGEMNEILKLDDMVTFNPHLIFKNITNSVEQASDSDI----------AT 1769

  Fly   199 SAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPDYRRVIVEVYASDLQIQDFEGSPATARYNINA 263
            :|......:.|        |||       .:.|.::....::||..::..:|.......|...|.
  Fly  1770 AAFVREIFSDR--------ANG-------KILPFFKEKTQQLYAGHVEEVNFHVVNDIVRRRTNL 1819

  Fly   264 YVAQHTKNHI-----ENIIASDIPQTTRMILANALYFKAFWETDFIESATR-------------- 309
            .|.:||...:     .|.:..:.|..|  |.||      .::||....:|.              
  Fly  1820 LVKRHTMGKVLEYLRTNSVWVNGPLAT--ISAN------LFQTDCSHGSTTDRDGEMFFQVHPTV 1876

  Fly   310 --------PDNFYPNG--EGTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNLSTMYIIQP 364
                    |...|.:|  .|.||.:...:::.|..                  :..:||:|::..
  Fly  1877 RQRRLVPIPAVLYRSGFLAGYEPSLDATVVSFGRV------------------QNTVSTVYVMPG 1923

  Fly   365 FKSSVRELMALQKRLTADKIES-----------MISRMYRRAALVAFPKMHLTESVNLKTVMQRM 418
            .:||:..:..|. ||....:|:           :.|.|.|....|..|:......||....:|:|
  Fly  1924 HQSSISPMDNLD-RLERSLVETAFSDKQAWRRLLTSLMDRPGMEVQLPRFSHRSFVNASLGLQKM 1987

  Fly   419 GLGGIFSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDF-TVN 482
            ||.|:|.:...||                          |..||....|:.:.|::....| |..
  Fly  1988 GLRGLFKSDFADL--------------------------RGLTGAGNRDIFLSDMIQINTFSTCG 2026

  Fly   483 EQGTEAAASSVTY----LKKSGPDV-------------------------LFRG----------- 507
            |:..........|    |:|...||                         |.||           
  Fly  2027 EEKISEHHHVEMYPAPPLRKRNKDVDATDDDAFDSSERVVDFGSLVQESALGRGFYDDLLDPKYL 2091

  Fly   508 ---------------------DTPFMVLVRHDPTKLVLFYGLIN 530
                                 |.||:..|||:||.::||.|..|
  Fly  2092 ELPLPLRPRQARVPDAPRLRFDKPFLYFVRHNPTGMILFMGRFN 2135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 98/522 (19%)
CG43366NP_610188.2 SERPIN 1687..2136 CDD:294093 101/528 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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