DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Spn28Dc and Spn28Db

DIOPT Version :10

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001356884.1 Gene:Spn28Db / 326261 FlyBaseID:FBgn0053121 Length:377 Species:Drosophila melanogaster


Alignment Length:444 Identity:106/444 - (23%)
Similarity:187/444 - (42%) Gaps:104/444 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 IANSVLNFANILGQHLANGKTQ---IYSPLSIVHSLALLLLGAKGRSYEELSTVFDIP-DTSRLH 168
            ||.|||....:....|...|.:   |.|||.|...::::|:||||.:.|||.:|.|:| |.:.:.
  Fly    15 IATSVLGKFKLNLLELVMDKAESNFIASPLCIEIGISMILMGAKGTTAEELRSVLDLPVDVTEMA 79

  Fly   169 EQFGLMLQDLQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPDY 233
            :::..::.:.|:..      |...|:|                         |:....|.:..||
  Fly    80 KKYERIMSNFQKHN------GLRFTNW-------------------------LYVNETYEVRQDY 113

  Fly   234 RRVIVEVYASDLQIQDFEG-SPATARYNINAY-VAQHTKNH-----IENIIASDIPQTTRMILAN 291
            ..::...:.:       || .|.:.|...|:. .:.|.|:|     |.|.....|.::.  :|.|
  Fly   114 NTLMKSTFMA-------EGKDPLSQRKASNSISFSIHRKSHKGMRTISNDHNLQINESA--VLVN 169

  Fly   292 ALYFKAFWETDFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNL 356
            .:|:...|:|.|.:..|:...|:  |:..:.|. |:||:..|.:.. .||..| :||.:|:..:.
  Fly   170 TVYYSGAWKTRFSKKDTKLKVFH--GDHNKKVY-VRMMSHVGRFRI-ADHSYG-QIIEMPFDNSD 229

  Fly   357 STMYIIQP----FKSSVRELMALQKRLTADKIESMISRMYRRAALVAFPKMHLTESVNLKTVMQR 417
            .:|.|..|    :.||:.:::   :.|:...:|:.:.        |..||..:.....|...:::
  Fly   230 LSMIIGLPLHNTYLSSIEKIL---RTLSESLVENNVH--------VELPKFKIKYQTELVESLKK 283

  Fly   418 MGLGGIFSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVN 482
            :|:..|||.. :|||.:.||                      |||..     ::.:|||....:|
  Fly   284 LGIHLIFSNT-SDLSGLLTN----------------------GTGAK-----INHVVHKSFIEIN 320

  Fly   483 EQGT---EAAASSVTYLKKSGPDVLFRGDTPFMVLVRHDPTKLVLFYGLINEPP 533
            |:|.   ||:..:.:..||:.....|:.:.||:.|:|...|  |.|.|.:...|
  Fly   321 ERGASTGEASDHAESIQKKTRASTSFKVNRPFVFLIRDKHT--VYFRGRVVRLP 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 serpin28D-like_insects 111..532 CDD:381061 103/438 (24%)
Spn28DbNP_001356884.1 serpin 18..370 CDD:476815 103/437 (24%)

Return to query results.
Submit another query.