DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and serpina1

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:XP_017207927.1 Gene:serpina1 / 322701 ZFINID:ZDB-GENE-030131-1421 Length:433 Species:Danio rerio


Alignment Length:441 Identity:105/441 - (23%)
Similarity:187/441 - (42%) Gaps:99/441 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 NFANILGQHLAN-----GKTQIYSPLSIVHSLALLLLGAKGRSYEELSTVFDIPDTSRLHEQFGL 173
            :||..|.:.||:     ||...:||:.|..:|:||.:|||..:   ||.::.           ||
Zfish    72 DFAFSLYKKLASNPDGQGKNIFFSPVGISMALSLLAVGAKAST---LSQIYS-----------GL 122

  Fly   174 MLQDLQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLAN------------GLFTQTG 226
            ....|   |.|.::.|.                     .|.:|:..            |:..:.|
Zfish   123 GYSAL---TPEQVNEGY---------------------EHLLHMLGHSQDAMQLEAGAGVAIRDG 163

  Fly   227 YTLNPDYRRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIASDIPQTTRMILAN 291
            :.:...:.:.....|.|:....|| ..|..|...||.::|:.|.:.|.|:: .|:...|.|:|.|
Zfish   164 FKVVDQFLKDAQHYYNSEAFGVDF-SKPEIAAAEINKFIARKTHDKITNMV-KDLDADTVMMLIN 226

  Fly   292 ALYFKAFWETDFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNL 356
            .:||:..||..|....|...:|..:.:.|   ::|.||...|.|..::|......::.:||:||.
Zfish   227 YMYFRGKWEKPFDAKLTHKADFKVDQDTT---VQVDMMKRTGRYDIYQDPVNQTTVMMVPYKGNT 288

  Fly   357 STMYIIQPFKSSVRELMALQKRLTADKIESMISRMYRRAALVAFPKMHLTESVNLKTVMQRMGLG 421
            | |.|:.|....::|   |::.:....:::...:::|.:..:..||..::.:..|..:::.||:.
Zfish   289 S-MMIVLPDDGKMKE---LEESICRHHLKNWHDKLFRSSVDLFMPKFSISATSKLDGILKDMGMT 349

  Fly   422 GIFSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSD--LVVDDIVHKVDFTVNEQ 484
            ..|    ||                           :|...|...:  :.|..::|:...:|:|:
Zfish   350 DAF----ND---------------------------KADFSGMTEEVKVKVSQVLHQAVMSVDEK 383

  Fly   485 GTEAAA-SSVTYLKKSGPDVLFRGDTPFMVLVRHDPTKLVLFYGLINEPPA 534
            |||||| :::..:..|.||.:.. :.||:||:..|.|..:||.|.|..|.|
Zfish   384 GTEAAAITTIEIMPMSLPDTVIL-NRPFLVLIVEDSTMSILFMGKITNPTA 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 101/432 (23%)
serpina1XP_017207927.1 alpha-1-antitrypsin_like 69..428 CDD:239011 102/434 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D491891at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
33.020

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