DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Serpinb11

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:XP_006249694.2 Gene:Serpinb11 / 304689 RGDID:1306497 Length:522 Species:Rattus norvegicus


Alignment Length:414 Identity:112/414 - (27%)
Similarity:187/414 - (45%) Gaps:57/414 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 GKTQIYSPLSIVHSLALLLLGAKGRSYEELSTVFDIPDTSRLH-EQFGLMLQDLQQPTREAISAG 189
            |:...:|||:..::|::|||||:|:|.|::..|        || :.|...|:...:.:.|....|
  Rat   159 GENIFFSPLTTFYALSMLLLGARGKSAEQMEKV--------LHYDNFSGFLKAKIKNSSECSQGG 215

  Fly   190 RPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPDYRRVIVEVYASDLQIQDFEGSP 254
            |...::|   |:.|:...|    :.:.:||.::.......:..|.|...::|.:.||..|||.|.
  Rat   216 RMHPEFR---ALVSHINQQ----NSLSIANRIYGTKAIEFHKQYIRCCEKLYQAKLQTVDFELSA 273

  Fly   255 ATARYNINAYVAQHTKNHIENII-ASDIPQTTRMILANALYFKAFWETDFIESATRPDNFYPNGE 318
            ...|.:|||:|...|...|.|:. ...|..::.|:|.:|:|||..|:..|.::.|....|:.: .
  Rat   274 EETRKSINAWVENKTHGKITNLFDKGTIDPSSVMVLVSAIYFKGQWQNKFQKTETVKAPFHIS-V 337

  Fly   319 GTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNLSTMYIIQPF-KSSVRELMALQKRLTAD 382
            |...|  |.||...|.:......|...:::.|||..|...|.|:.|. .:||.:   ::|.|.|.
  Rat   338 GKSAV--VDMMYQTGTFKLAFIKEPQMQVLELPYANNKLRMIILLPVGTASVNQ---IEKHLNAK 397

  Fly   383 KIESMI--SRMYRRAALVAFPKMHLTESVNLKTVMQRMGLGGIFSAVQNDLSLIATNEATRTNAL 445
            .:....  |.|..|...|..||..|:...:|.|:::.:|:..||:..:.|||.::.::.      
  Rat   398 MLREWTSPSNMVERVVDVHIPKFSLSVKYDLNTLLKSLGMSDIFNVAKADLSGMSPDKG------ 456

  Fly   446 GGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNEQGTEAAASS--VTYLKKSGPDVLFRGD 508
                                  |.:..:|||....|||:||||||::  ...:|:....|.|..:
  Rat   457 ----------------------LYLSKVVHKSYVDVNEEGTEAAAATGETISVKRLPVTVQFTAN 499

  Fly   509 TPFMVLVRHDPTKLVLFYGLINEP 532
            .||:..: .|....:||.|....|
  Rat   500 CPFLFFI-WDEFYNILFAGKFASP 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 110/407 (27%)
Serpinb11XP_006249694.2 SERPIN 138..522 CDD:294093 111/412 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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