DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and LOC299277

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:XP_008763124.2 Gene:LOC299277 / 299277 RGDID:1595900 Length:420 Species:Rattus norvegicus


Alignment Length:454 Identity:103/454 - (22%)
Similarity:186/454 - (40%) Gaps:106/454 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 SDRIANSVLNFANILGQHLA---NGKTQIYSPLSIVHSLALLLLGAKGRSYEEL--STVFDIPDT 164
            |..:|:...:||..|.:.||   ..|...:|||||..:||.|.|||||.:.:|:  ...|::.:|
  Rat    44 SGTLASINTDFAFSLYKELALKNPNKNIAFSPLSISAALASLSLGAKGNTLQEILEGLKFNLTET 108

  Fly   165 SR--LHEQFGLMLQDLQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGY 227
            :.  :|:.:..:||.|.||                            .|..::..||.||.:...
  Rat   109 TEIDIHQNYRDLLQRLSQP----------------------------GGQGQISRANLLFVEKHL 145

  Fly   228 TLNPDYRRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIASDIPQTTRMILANA 292
            .:...::.....:|.:::...||: ....||..||.||...::..|:.:: :::.:.|.:::.|.
  Rat   146 QILNGFKEKAKALYQTEVFATDFQ-QTCEARKFINDYVMIQSQGKIKEMV-TELEERTSIVMLNF 208

  Fly   293 LYFKAFWETDFIESATRPDNFYPNG---EGTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRG 354
            |.|...|...|     .||:.:...   :...||..:.|.......||..|.||.|.::.|.|:|
  Rat   209 LLFTGQWSVPF-----DPDDTFMGKFILDSRRPVKVLMMKTEDLTTPYFWDEELKCTVVELNYKG 268

  Fly   355 NLSTMYIIQPFKSSVRELMALQKRLTADK-IESMISRMYRRAALVAFPKMHLTESVNLKTVMQRM 418
            :...|:|: |.:..:.::.|.....|..| .:|:..|:.....|   ||..|:::..|:.::..:
  Rat   269 HGKAMFIL-PDQGKMEQVEASLHPGTLRKWTDSLKPRIIDELHL---PKFSLSKTYKLENILPEL 329

  Fly   419 GLGGIFSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNE 483
            |:..:|: .|.|||                           |..||: |:.|..::|.....:.|
  Rat   330 GIMDVFN-TQADLS---------------------------GIAGAK-DVRVSQMIHNTVLGMAE 365

  Fly   484 QGTEAAASS---------------VTYLKKSGPDVLFRGDTPFMVLVRHDPTKLVLFYGLINEP 532
            .||||.|::               |.:::|            |:.:|....::|:.|...:..|
  Rat   366 TGTEAEATTRVEYNFRPAKLNDTFVNFVRK------------FLYMVLEPNSELISFMRKVINP 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 100/441 (23%)
LOC299277XP_008763124.2 serpinA3_A1AC 37..417 CDD:381019 102/452 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D491891at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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