DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Serpina3m

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001257911.1 Gene:Serpina3m / 299276 RGDID:735068 Length:419 Species:Rattus norvegicus


Alignment Length:417 Identity:112/417 - (26%)
Similarity:190/417 - (45%) Gaps:74/417 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 KTQIYSPLSIVHSLALLLLGAKGRSYEELSTV--FDIPDT--SRLHEQFGLMLQDLQQPTREAIS 187
            |..::|||||..:||::.|||||.:.||:..|  |::.::  :.:|:.||.:||.|.||..:.  
  Rat    69 KNVVFSPLSISAALAIVSLGAKGNTLEEILEVLRFNLTESYETDIHQGFGHLLQRLSQPGDQV-- 131

  Fly   188 AGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPDYRRVIVEVYASDLQIQDFEG 252
                                      ::...|.||......:..:::.....:|..:....||: 
  Rat   132 --------------------------KIITGNALFIDKNLQVLAEFQEKTRALYQVEAFTADFQ- 169

  Fly   253 SPATARYNINAYVAQHTKNHIENIIASDIPQTTRMILANALYFKAFWETDFIESATRPDNFYPNG 317
            .|......||.||...|:..|:.:: |.:.:.|.|:|.|.|.|:..|:..|....|....||.:.
  Rat   170 QPRVTEKLINDYVRNQTQGKIQELV-SGLKERTSMVLVNYLLFRGKWKVPFDPDYTFESEFYVDE 233

  Fly   318 EGTEPV--MRVQMMATGGAYPYHEDHELGCKIIGLPYRGNLSTMYIIQPFKSSVRELMALQKRLT 380
            :.:..|  |:::.:.|    ||..|.||.|.::.|.|.||.|.::|: |.|..::::.|..:..|
  Rat   234 KRSVKVSMMKIEELTT----PYFRDEELSCSVLELKYTGNSSALFIL-PDKGRMQQVEASLQPET 293

  Fly   381 ADKIESMISRMYRRAALVAFPKMHLTESVNLKTVMQRMGLGGIFSAVQNDLSLIATNEATRTNAL 445
            ..|.:.  |...|:...:..|::.::...:|:.|:..:|:..:||. |.|||.|.          
  Rat   294 LKKWKD--SLRPRKIDELYLPRLSISTDYSLEEVLPELGIRDVFSQ-QADLSRIT---------- 345

  Fly   446 GGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNEQGTEAAASS-VTYLKKSG-PDVLFRGD 508
                             ||: ||.|..:||||...|||.||||||:: ...:.:|| |.::...:
  Rat   346 -----------------GAK-DLSVSQVVHKVVLDVNETGTEAAAATGANLVPRSGRPPMIVWFN 392

  Fly   509 TPFMVLVRHDPTKLVLFYGLINEPPAA 535
            .||::.|.|...:.:||...:..|..|
  Rat   393 RPFLIAVSHTHGQTILFMAKVINPVGA 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 110/407 (27%)
Serpina3mNP_001257911.1 SERPIN 56..416 CDD:214513 110/412 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D491891at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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