DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Serpina6

DIOPT Version :10

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001009663.1 Gene:Serpina6 / 299270 RGDID:1595901 Length:396 Species:Rattus norvegicus


Alignment Length:428 Identity:96/428 - (22%)
Similarity:178/428 - (41%) Gaps:85/428 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 SNGYVDLATSDRIANSVLNFANILGQHLA---NGKTQIYSPLSIVHSLALLLLG-AKGRSYEELS 156
            ||.:..||.::      ::||..|.|.|.   ..|..:.||:||..:||::.|| |:.:|.:.|.
  Rat    28 SNSHRGLAPTN------VDFAFNLYQRLVALNPDKNTLISPVSISMALAMVSLGSAQTQSLQSLG 86

  Fly   157 TVFDIPDTS--RLHEQFGLMLQDLQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLAN 219
              |::.:||  .:|:.|..:...|:|                :.:.:            |:::.|
  Rat    87 --FNLTETSEAEIHQSFQYLNYLLKQ----------------SDTGL------------EMNMGN 121

  Fly   220 GLFTQTGYTLNPDYRRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIASDIPQT 284
            .:|......|...:...:.:.|.|:....||| ....|...||.:|...|:..||::. ||:...
  Rat   122 AMFLLQKLKLKDSFLADVKQYYESEALAIDFE-DWTKASQQINQHVKDKTQGKIEHVF-SDLDSP 184

  Fly   285 TRMILANALYFKAFWETDFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPYHEDHELGCKIIG 349
            ...||.|.::.:..||..|....||.::||.|...|   ::|.||...|:..|..|....|::|.
  Rat   185 ASFILVNYIFLRGIWELPFSPENTREEDFYVNETST---VKVPMMVQSGSIGYFRDSVFPCQLIQ 246

  Fly   350 LPYRGNLSTMYIIQPFKSSVRELMALQKRLTADKIESMISRMYRRAALVAFPKMHLTESVNLKTV 414
            :.|.|| .|.:.|.|.:..:..::|...|.|.|:...:   |..|...:..||..::::.:||.:
  Rat   247 MDYVGN-GTAFFILPDQGQMDTVIAALSRDTIDRWGKL---MTPRQVNLYIPKFSISDTYDLKDM 307

  Fly   415 MQRMGLGGIFSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDF 479
            ::.:.:..:.:. |:|.|                             |..:...:...:|||...
  Rat   308 LEDLNIKDLLTN-QSDFS-----------------------------GNTKDVPLTLTMVHKAML 342

  Fly   480 TVNEQGT--EAAASSVTYLKKSGPDVLFRGDTPFMVLV 515
            .::|...  .:...:..:|:....|:.|  :.||::|:
  Rat   343 QLDEGNVLPNSTNGAPLHLRSEPLDIKF--NKPFILLL 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 serpin28D-like_insects 111..532 CDD:381061 92/413 (22%)
Serpina6NP_001009663.1 serpinA6_CBG 28..396 CDD:381022 96/428 (22%)

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