DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Serping1

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_954524.1 Gene:Serping1 / 295703 RGDID:735225 Length:504 Species:Rattus norvegicus


Alignment Length:589 Identity:122/589 - (20%)
Similarity:216/589 - (36%) Gaps:152/589 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LLLALLLVSSVCCESELF--------------------RDDLRTP-------ETMAYINGLMQ-R 40
            |||.||.......:||:.                    ||..|:|       .|....:|..: .
  Rat    10 LLLLLLAGDRAFSDSEVTSHSSQDPLVVQEGSRDSVPERDGSRSPIEHTGQSSTWPTTSGSTKIS 74

  Fly    41 RHQMQQEAQ----QHIQ---AIPPAVPLQSPGLVNGLGNQNDPALNRISGTSVKPSNLPA----- 93
            ...|.|.|.    ||:|   .:|...|.|||      .|.:.|.    |..|..|:..|.     
  Rat    75 NDTMDQVANESFIQHVQPAAQLPEDSPSQSP------VNSSSPP----STASAPPTQAPTEPLCP 129

  Fly    94 ---AYSNGYVDLATSDR------IANSVLNFANILGQHLANGK----TQIYSPLSIVHSLALLLL 145
               |:      .:.|||      ::.::.:|:..|....:..|    ...:||.||...|..:||
  Rat   130 EPLAW------CSDSDRDSSEATLSEALTDFSVKLYHAFSATKKAETNMAFSPFSIASLLTQVLL 188

  Fly   146 GAKGRSYEELSTVFDIPDTSRLHEQFGLMLQDLQQPTREAISAGRPLTDWRASSAMRSNRRAQRP 210
            ||...:...|..:...|      :.|..:.|.|:..:.:.:::                      
  Rat   189 GAGDSTKSNLEDILSYP------KDFACVHQTLKAFSSKGVTS---------------------- 225

  Fly   211 GAHEVHLANGLFTQTGYTLNPDYRRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIEN 275
                   .:.:|......:...|....:.:|.|..::...:|. |..:. ||.:||::| ||..|
  Rat   226 -------VSQIFHSPDLAIRDTYVNASLSLYGSSPRVLGPDGD-ANLKL-INTWVAENT-NHKIN 280

  Fly   276 IIASDIPQTTRMILANALYFKAFWETDFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYP--YH 338
            .:...:|..||::|.||:|..|.|:..|.:........|.|.     :::|.|::: ..||  ..
  Rat   281 ELLDSLPSDTRLVLLNAVYLSAKWKKTFEQKKMMASFLYKNS-----MIKVPMLSS-KKYPLALF 339

  Fly   339 EDHELGCKIIGLPYRGNLSTMYIIQPFKSSVRELMALQKRLTADKIESMISRMYR---RAALVAF 400
            .|..|..|:..|....|||  ::|...:|...:|..::|.|.....::::.::..   :...|..
  Rat   340 NDQTLKAKVGQLQLSHNLS--FVIMVPQSPTHQLEDMEKALNPTVFKAILKKLELSKFQPTYVMM 402

  Fly   401 PKMHLTESVNLKTVMQRMGLGGIFSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGAR 465
            |::.:..|.::.::|:::.    |.....||:|....|                          .
  Rat   403 PRIKVKSSQDMLSIMEKLE----FFDFTYDLNLCGLTE--------------------------D 437

  Fly   466 SDLVVDDIVHKVDFTVNEQGTEAAASSVTYLKKSGPDVLFRGDTPFMVLVRHDPTKLVLFYGLIN 530
            .||.|..:.|:....:.|.|.||||:|...:.::  .::|....||:.|:.....|..:|.|.:.
  Rat   438 PDLQVSSMKHETVLELTETGVEAAAASTISVARN--LLIFEVQQPFLFLLWDQRHKFPVFMGRVY 500

  Fly   531 EPPA 534
            :|.|
  Rat   501 DPRA 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 85/424 (20%)
Serping1NP_954524.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 23..75 8/51 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 94..132 11/47 (23%)
SERPIN 150..499 CDD:294093 86/426 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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