DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Serpinb8

DIOPT Version :10

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001099418.1 Gene:Serpinb8 / 288937 RGDID:1309833 Length:375 Species:Rattus norvegicus


Alignment Length:432 Identity:106/432 - (24%)
Similarity:189/432 - (43%) Gaps:81/432 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 LNFANILGQHLANGKTQIYSPLSIVHSLALLLLGAKGRSYEELSTVFDIPDTSRLHEQFGLMLQD 177
            ::...|||:. ...:...:.|:|:..:||::.|||||.:..::|.|..:.....:|:.|..:|.:
  Rat    13 ISLLKILGEE-DKSRNLFFCPMSVSSALAMVYLGAKGNTATQMSQVLGLSGDGDVHQGFQTLLAE 76

  Fly   178 LQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPDYRRVIVEVYA 242
            :.:       :|   |.:...||.|                  ||.:........::....:.|.
  Rat    77 VNK-------SG---TQYLLKSACR------------------LFGEESCDFLSTFKESCQKFYQ 113

  Fly   243 SDLQ----IQDFEGSPATARYNINAYVAQHTKNHIENIIASDIPQT----TRMILANALYFKAFW 299
            :.::    ::|.||    .|..||.:|.:.|:..|..:::   |.|    |:::|.||:|||..|
  Rat   114 AGIEEMSFVKDTEG----CRKRINDWVLEKTEGKISEVLS---PGTVCPLTKLVLVNAMYFKGKW 171

  Fly   300 ETDFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNLSTMYIIQP 364
            :..|....||...|..|.|..:   .||||.....:......|:..:::.|||..:..:|.::.|
  Rat   172 KAQFDRKYTRGMPFKTNQEEKK---TVQMMFKHAKFKMAHVDEVNAQVLALPYAEDELSMVVLLP 233

  Fly   365 FKSSVRELMALQKRLTADKIESMIS--RMYRRAALVAFPKMHLTESVNLKTVMQRMGLGGIFSAV 427
            .:||  :|..::|.||.:|:.:..:  .:......|.||::.|.||.:|:||:|.:|:...|   
  Rat   234 DESS--DLTVVEKALTYEKLRAWTNPETLTESKVQVFFPRLKLEESYDLETVLQSLGMTDAF--- 293

  Fly   428 QNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNEQGTEAAASS 492
                      |.|:.:..|..|.:|:.               |..:.||....|||:||||||::
  Rat   294 ----------EETKADFSGMTSKKNVP---------------VSKVAHKCFVEVNEEGTEAAATT 333

  Fly   493 --VTYLKKSGPDVLFRGDTPFMVLVRHDPTKLVLFYGLINEP 532
              :...:....:..|..|.||:..:.|..|..:||.|..:.|
  Rat   334 AVIRNTRSCRIEPRFCADRPFLFFIWHQKTSSILFCGRFSSP 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 serpin28D-like_insects 111..532 CDD:381061 105/430 (24%)
Serpinb8NP_001099418.1 serpin 1..375 CDD:476815 105/430 (24%)

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