DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Serpinb1b

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_766640.1 Gene:Serpinb1b / 282663 MGIID:2445361 Length:382 Species:Mus musculus


Alignment Length:412 Identity:117/412 - (28%)
Similarity:184/412 - (44%) Gaps:69/412 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 YSPLSIVHSLALLLLGAKGRSYEELSTVFDIPDTSRLHEQFGLMLQDLQQPTREAISAGRPLTDW 195
            :||.||..|||::.|||||.:..:||..........:|..|       |..|.|....|      
Mouse    30 FSPFSISSSLAMVFLGAKGSTAAQLSKTLHFDSVEDIHSCF-------QSLTAEVSKLG------ 81

  Fly   196 RASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPDYRRVIVEVYASDLQIQDFEGSPATARYN 260
                           .:|.:.|||.|:.:..|...|::.....::|::||...||:.:...||..
Mouse    82 ---------------ASHTLKLANRLYGEKTYNFLPEFLASTQKMYSADLAAVDFQHASEDARKE 131

  Fly   261 INAYVAQHTKNHIENIIASDIPQT-TRMILANALYFKAFWETDFIESATRPDNFYPNGEGTEPVM 324
            ||.:|...|:..|..::|..:..: |:::|.||:|||..||..|:...|....|..|.:.|:   
Mouse   132 INQWVKGQTEGKIPELLAKGVVDSMTKLVLVNAIYFKGIWEEQFMTRETINAPFRLNKKDTK--- 193

  Fly   325 RVQMMATGGAYPYHEDHELGCKIIGLPYRGNLSTMYIIQP--FKSSVRELMALQKRLTADKIESM 387
            .|:||.....:|:....:|.||::.:||:|...:|.|:.|  .:.....|..::::||..|:...
Mouse   194 TVKMMYQKKKFPFGYISDLKCKVLEMPYQGGELSMVILLPEDIEDESTGLKKIEEQLTLGKLHEW 258

  Fly   388 ISRMYRR--AALVAFPKMHLTESVNLKTVMQRMGLGGIFSAVQNDLSLIATNEATRTNALGGNSL 450
            ......|  ...|..|:..:.||..|.:.:..:|:..:||:.:.|||                  
Mouse   259 TKHENLRNIDVHVKLPRFKMEESYILNSNLCCLGVQDLFSSGKADLS------------------ 305

  Fly   451 QNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNEQGTEAAASS-----VTYLKKSGPDVLFRGDTP 510
                     |..|:| ||.|..||||....||||||||||::     |...|...|..:|..|.|
Mouse   306 ---------GMSGSR-DLFVSKIVHKSFVDVNEQGTEAAAATGGIIQVLCEKMPTPQEVFTVDHP 360

  Fly   511 FMVLVRHDPTKLVLFYGLINEP 532
            |:..:||:||..::|:|.:..|
Mouse   361 FLFFIRHNPTANMIFFGRVCSP 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 115/405 (28%)
Serpinb1bNP_766640.1 serpinB1_LEI 1..382 CDD:381028 116/410 (28%)
CARD-binding motif (CBM). /evidence=ECO:0000250|UniProtKB:P30740 352..382 10/29 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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