DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Serpina3n

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_113719.3 Gene:Serpina3n / 24795 RGDID:3747 Length:418 Species:Rattus norvegicus


Alignment Length:444 Identity:127/444 - (28%)
Similarity:204/444 - (45%) Gaps:92/444 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 IANSVLNFANILGQHLA---NGKTQIYSPLSIVHSLALLLLGAKGRSYEEL--STVFDIPDT--S 165
            :|:...:||..|.:.||   ..|..::|||||..:||::.|||||.|.||:  ...|::.:|  :
  Rat    47 LASINTDFAFSLYKKLALRNPDKNVVFSPLSISAALAVVSLGAKGNSMEEILEGLKFNLTETPET 111

  Fly   166 RLHEQFGLMLQDLQQPTRE-AISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTL 229
            .:|..||.:||.|.||..| .||.|                             |.||.:....:
  Rat   112 EIHRGFGHLLQRLSQPRDEIQISTG-----------------------------NALFIEKRLQV 147

  Fly   230 NPDYRRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIASDIPQTTRMILANALY 294
            ..:::.....:|.::....||:.| ..|:..||.||::.|:..|:.:| :::.:.|.|:|.|.:|
  Rat   148 LAEFQEKAKALYQAEAFTADFQQS-REAKKLINDYVSKQTQGKIQGLI-TNLAKKTSMVLVNYIY 210

  Fly   295 FKAFWETDFIESATRPDNFYPNGEGTE---PVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNL 356
            ||..|:..|....|....|| :|:...   |:|:::.:.|    ||..|.||.|.::.|.|.||.
  Rat   211 FKGKWKVPFDPRDTFQSEFY-SGKRRPVKVPMMKLEDLTT----PYVRDEELNCTVVELKYTGNA 270

  Fly   357 STMYIIQPFKSSVRELMA-LQK---RLTADKIE-SMISRMYRRAALVAFPKMHLTESVNLKTVMQ 416
            |.::|: |.:..::::.| ||.   |...|.:. |||..:|       .||..::...||:.|:.
  Rat   271 SALFIL-PDQGKMQQVEASLQPETLRRWKDSLRPSMIDELY-------LPKFSISADYNLEDVLP 327

  Fly   417 RMGLGGIFSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTV 481
            .:|:..:|| .|.|||.|                          ||.  .||:|..:|||....|
  Rat   328 ELGIKEVFS-TQADLSGI--------------------------TGD--KDLMVSQVVHKAVLDV 363

  Fly   482 NEQGTEAAASS-VTYLKKSG--PDVLFRGDTPFMVLVRHDPTKLVLFYGLINEP 532
            .|.||||||:: |.::..|.  ..::...|.||::::....|.:..|...|..|
  Rat   364 AETGTEAAAATGVKFVPMSAKLDPLIIAFDRPFLMIISDTETAIAPFLAKIFNP 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 124/434 (29%)
Serpina3nNP_113719.3 serpinA3_A1AC 37..418 CDD:381019 127/444 (29%)
RCL 367..394 8/26 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D491891at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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