DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Serpinb6a

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001157589.1 Gene:Serpinb6a / 20719 MGIID:103123 Length:399 Species:Mus musculus


Alignment Length:434 Identity:110/434 - (25%)
Similarity:190/434 - (43%) Gaps:82/434 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 LNFANILGQHLANGKTQIYSPLSIVHSLALLLLGAKGRSYEELSTVFDIPDTS-----RLHEQFG 172
            ||...|||:.  :.|....||:||..:||::.:||||.:..:::....:...|     .:|:.|.
Mouse    34 LNLLKILGED--SSKNVFLSPMSISSALAMVFMGAKGTTASQMAQALALDKCSGNGGGDVHQGFQ 96

  Fly   173 LMLQDLQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPDYRRVI 237
            .:|.::.:...:.:                            :..||.||......|...::...
Mouse    97 SLLTEVNKTGTQYL----------------------------LRTANRLFGDKTCDLLASFKDSC 133

  Fly   238 VEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIA-SDIPQTTRMILANALYFKAFWET 301
            ::.|.::|:..||:|:...:|.:||.:||:.|::.|:.::: ..:...|.::|.||:|||..||.
Mouse   134 LKFYEAELEELDFQGATEESRQHINTWVAKKTEDKIKEVLSPGTVNSDTSLVLVNAIYFKGNWEK 198

  Fly   302 DFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNLSTMYIIQPFK 366
            .|.:..||...|..:....:|   ||||.....:......|:..||:.|||..:...|.|:.|.:
Mouse   199 QFNKEHTREMPFKVSKNEEKP---VQMMFKKSTFKMTYIGEIFTKILLLPYVSSELNMIIMLPDE 260

  Fly   367 SSVRELMALQKRLTADK-IE-SMISRMYRRAALVAFPKMHLTESVNLKTVMQRMGLGGIFSAVQN 429
            ..  ||..::|.:|.:| || :.:.:|......|..||..|.|:.|:...:.::|:         
Mouse   261 HV--ELSTVEKEVTYEKFIEWTRLDKMDEEEVEVFLPKFKLEENYNMNDALYKLGM--------- 314

  Fly   430 DLSLIATNEATRTNALGGNSLQNLEAQRRAGTGG--ARSDLVVDDIVHKVDFTVNEQGTEAAASS 492
                        |:|.||          ||...|  ::..|.:..:|||....|||:||||||::
Mouse   315 ------------TDAFGG----------RADFSGMSSKQGLFLSKVVHKAFVEVNEEGTEAAAAT 357

  Fly   493 VTYL----KKSGPDVLFRGDTPFMVLVRHDPTKLVLFYGLINEP 532
            ...:    .:..|  .|..|.||:..:.|..|..:||.|..:.|
Mouse   358 AGMMTVRCMRFTP--RFCADHPFLFFIHHVKTNGILFCGRFSSP 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 108/427 (25%)
Serpinb6aNP_001157589.1 SERPIN 25..399 CDD:294093 109/432 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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