DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Serpina1a

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001239498.1 Gene:Serpina1a / 20700 MGIID:891971 Length:436 Species:Mus musculus


Alignment Length:438 Identity:111/438 - (25%)
Similarity:187/438 - (42%) Gaps:78/438 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 SDRIANSVLNFANILGQ---HLANGKTQIYSPLSIVHSLALLLLGAKGRSYEEL--STVFDIPDT 164
            |..||.::.:||..|.:   |.:|.....:||:||..:.|:|.||:||.::.::  ...|::..|
Mouse    64 SHEIATNLGDFAISLYRELVHQSNTSNIFFSPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQT 128

  Fly   165 SR--LHEQFGLMLQDLQQPTRE-AISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTG 226
            |.  :|:.|..:||.|.:|..| .:|.|                             ||||....
Mouse   129 SEADIHKSFQHLLQTLNRPDSELQLSTG-----------------------------NGLFVNND 164

  Fly   227 YTLNPDYRRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIASDIPQTTRMILAN 291
            ..|...:.......|.:::...:|..| ..|:..||.:|.:.|:..|...: ..:.|.|...|||
Mouse   165 LKLVEKFLEEAKNHYQAEVFSVNFAES-EEAKKVINDFVEKGTQGKIAEAV-KKLDQDTVFALAN 227

  Fly   292 ALYFKAFWETDFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNL 356
            .:.||..|:..|....|....|:.:...|   ::|.||...|....|....|...::.:.|.||.
Mouse   228 YILFKGKWKKPFDPENTEEAEFHVDESTT---VKVPMMTLSGMLHVHHCSTLSSWVLLMDYAGNA 289

  Fly   357 STMYIIQPFKSSVRELMALQKRLTADKIESMISRMYRRAALVAFPKMHLTESVNLKTVMQRMGLG 421
            :.:::: |....::.   |::.|:.:.|...:....||.|.:.||::.::...||||:|..:|:.
Mouse   290 TAVFLL-PDDGKMQH---LEQTLSKELISKFLLNRRRRLAQIHFPRLSISGEYNLKTLMSPLGIT 350

  Fly   422 GIFSAVQN--DLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNEQ 484
            .||:   |  |||.|     |..||                      .|.:...|||...|::|.
Mouse   351 RIFN---NGADLSGI-----TEENA----------------------PLKLSQAVHKAVLTIDET 385

  Fly   485 GTEAAASSVTYLKKSGPDVLFRGDTPFMVLVRHDPTKLVLFYGLINEP 532
            ||||||.:|..:.......:.|.|.||:.::..:.|:..:|.|.:.:|
Mouse   386 GTEAAAVTVLQMVPMSMPPILRFDHPFLFIIFEEHTQSPIFLGKVVDP 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 106/425 (25%)
Serpina1aNP_001239498.1 SERPIN 76..433 CDD:214513 105/424 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D491891at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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