DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Serpina12

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_620180.2 Gene:Serpina12 / 191570 RGDID:708485 Length:414 Species:Rattus norvegicus


Alignment Length:434 Identity:111/434 - (25%)
Similarity:195/434 - (44%) Gaps:89/434 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 LNFANILGQHLANGKTQ---IYSPLSIVHSLALLLLGAKGRSYEELSTVFDIPDTS--RLHEQFG 172
            :.|...|.|.||:...|   ..|||||..:.::|.|||:..:.||:...|:..:.|  .:|..|.
  Rat    53 MEFGFKLLQRLASNSRQGNIFLSPLSISTAFSMLSLGAQNSTLEEIREGFNFKEMSDRDMHMGFH 117

  Fly   173 LMLQDLQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPDYR--R 235
            .:||.|.:.|::.                            ::.:.|.||..  ..|.|..|  :
  Rat   118 YLLQKLNRETQDV----------------------------KMSIGNALFMD--QRLRPQQRFLK 152

  Fly   236 VIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIASDIPQTTRMILANALYFKAFWE 300
            :...:|.:|:.:.:|:....|.: |||.|:::.|.|.|||::.:..|.|. |:|.|.:||:..|:
  Rat   153 LAKNLYDADMILTNFQDLENTQK-NINKYISRKTHNRIENMVKNIDPGTV-MLLTNYIYFQGRWQ 215

  Fly   301 TDFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNLSTMYIIQPF 365
            .:|....|:.::|:.. ||  ..::|.||...|.|....|.:|.|.|:.:|||.|::..::: |.
  Rat   216 YEFDPKQTKEEDFFIE-EG--KTVKVPMMFQRGMYDMAYDSQLSCTILEMPYRRNITATFVL-PD 276

  Fly   366 KSSVRELMALQKRLTADKIESMISRMYRRAALVAFPKMHLTESVNLKTVMQRMGLGGIFSAVQND 430
            ...:|   .|::.|.||......|.:.:|...|..|::|::.:.|:|.|:.|:|:..||.. ..|
  Rat   277 SGKLR---LLEQGLQADIFAKWKSLLSKRVVDVWVPRLHISATYNMKKVLSRLGISKIFEE-HGD 337

  Fly   431 LSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNEQGTEAAASSVTY 495
            |:.|:::.:                            |.|.:.|||.:..:||:|||.||.    
  Rat   338 LTRISSHRS----------------------------LKVGEAVHKAELRMNEKGTEGAAG---- 370

  Fly   496 LKKSGPDVL-------FRGDTPFMVLVRHDPTKLVLFYGLINEP 532
               ||...|       .:.:.||::::..:....::|...|..|
  Rat   371 ---SGAQTLPMETPRRMKLNAPFLMMIYENLMPSMIFLARIYNP 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 109/427 (26%)
Serpina12NP_620180.2 alpha-1-antitrypsin_like 51..408 CDD:239011 109/429 (25%)
Reactive center loop. /evidence=ECO:0000250|UniProtKB:Q8IW75 364..382 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D491891at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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