DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Serpinb2

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001167641.1 Gene:Serpinb2 / 18788 MGIID:97609 Length:415 Species:Mus musculus


Alignment Length:450 Identity:115/450 - (25%)
Similarity:196/450 - (43%) Gaps:65/450 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 IANSVLNFA-NILGQHLANGKTQ--IYSPLSIVHSLALLLLGAKGRSYEELSTVFDIPD------ 163
            :||::  || |:|.|...:..||  ..||.||..:||::||||.|.:.::::.|....:      
Mouse     6 MANTM--FALNLLKQIEKSNSTQNIFISPWSISSTLAIVLLGAGGNTEQQMAKVLQFNEIGSYGI 68

  Fly   164 TSRLHE-----QFGLMLQDLQQPTREAI---SAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANG 220
            |:|..|     .|...:|....|:  ||   .||..:..  |.|::.|.....: |.:.:..||.
Mouse    69 TTRNPENFSGCDFAQQIQKENYPS--AILQAQAGDKIHS--AFSSLSSTINTPQ-GDYLLESANK 128

  Fly   221 LFTQTGYTLNPDYRRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENII-ASDIPQT 284
            ||.:.......:|.::..:.|:::.:..||......||..||::|...||..|.|:: ...:.:.
Mouse   129 LFGEKSARFKEEYIQLSKKYYSTEPEAVDFLECAEEAREKINSWVKTQTKGEIPNLLPEGSVDED 193

  Fly   285 TRMILANALYFKAFWETDFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPYHEDHELGCKIIG 349
            |:|:|.||:|||..|:|.|   ..:.:..||....:...:.||||............:|..:|:.
Mouse   194 TKMVLVNAVYFKGKWKTPF---EKKLNGLYPFRVNSHESIPVQMMFLHAKLNIGYIKDLKTQILE 255

  Fly   350 LPYRGNLSTMYII-QPFKSSVRELMALQKRLTADKIESMISR--MYRRAALVAFPKMHLTESVNL 411
            ||:.||:|.:.:: ...:.:...|..|:..:........||:  :.....:|..||..|.:|..|
Mouse   256 LPHTGNISMLLLLPDEIEDASTGLELLESEINFANFNKWISKDTLDEDDVVVYIPKFKLAQSYEL 320

  Fly   412 KTVMQRMGLGGIFSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHK 476
            |:::|.||:...|:..:.:.|              |.|              .|:||.:.::.|:
Mouse   321 KSILQSMGMEDAFNKGKANFS--------------GMS--------------ERNDLFLSEVFHQ 357

  Fly   477 VDFTVNEQGTEAAASSVTYLK----KSGPDVLFRGDTPFMVLVRHDPTKLVLFYGLINEP 532
            ....|.|:||.||..:...:.    ..||.  |..|.||:..:....|..:||.|..:.|
Mouse   358 ASVDVTEEGTVAAGGTGAVMTGRTGHGGPQ--FVADHPFLFFIMDKITHTILFVGRFSSP 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 111/440 (25%)
Serpinb2NP_001167641.1 SERPIN 4..415 CDD:294093 114/448 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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