DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and srp-2

DIOPT Version :10

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_503318.1 Gene:srp-2 / 178586 WormBaseID:WBGene00005643 Length:359 Species:Caenorhabditis elegans


Alignment Length:424 Identity:101/424 - (23%)
Similarity:174/424 - (41%) Gaps:100/424 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 ANSVLNFANILGQHLANGKTQIYSPLSIVHSLALLLLGAKGRSYEELSTVFDIPDTSRLHEQF-G 172
            |.|..:||..|...|.:..:.:.|||||...|||:..||.|.:.:||.   |:...||:.|:| |
 Worm     5 ATSQTDFALKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELE---DVLGGSRIFEEFSG 66

  Fly   173 LMLQDLQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPDYRRVI 237
            ||         ||:..    ||                ...|..:.|.:|....||::.||...:
 Worm    67 LM---------EAVGD----TD----------------NGVETKIVNRVFVNQAYTIHQDYLETV 102

  Fly   238 VEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIASDIPQTTRMILANALYFKAFWETD 302
            .::|.:..:..||..:...|: .:|.:|..||...|:::|.:|........|.||:||||.|::.
 Worm   103 EKLYKASGESLDFSQTEQAAK-TMNTFVENHTNGKIKDLIPADSANNAFAFLVNAMYFKADWQSK 166

  Fly   303 FIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPY------HEDH--ELGCKIIGLPYRGNLSTM 359
            |.:.:|....|:.:...:..:            |:      |.|:  ::..:::.|.|.....|:
 Worm   167 FAKESTTGREFFTSEAESRQI------------PFLTELDEHRDYTEDVLFQVLSLKYADPKFTL 219

  Fly   360 YIIQPFKSSVRELMALQKRLTADKIESMISRMYRRAALVAFPKMHLTESVNLKTVMQRMGLGGIF 424
            .|..| |.....:.||:| :..:.|:::::.:......|..||..:.:.::||..::.:|:..||
 Worm   220 AIFLP-KQRFGLVDALEK-INGEYIQNLLNDLKSSYVSVQIPKFKIEKELDLKETLEAIGIKEIF 282

  Fly   425 SAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNEQGTEAA 489
             |...|||                              |....:.:...:||....|:|.||.||
 Worm   283 -AEGADLS------------------------------GIADKVFISSGIHKAIIEVDEDGTTAA 316

  Fly   490 ASSVTYLKKSGPDVLFRGDTPFMVLVRHDPTKLV 523
            |:|.           |:.....|::.  :||:.|
 Worm   317 AASA-----------FKVQLEMMIMA--EPTQFV 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 serpin28D-like_insects 111..532 CDD:381061 100/422 (24%)
srp-2NP_503318.1 serpinL_nematode 7..358 CDD:381047 100/422 (24%)

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