DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Serpina10

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_598301.2 Gene:Serpina10 / 171154 RGDID:621220 Length:436 Species:Rattus norvegicus


Alignment Length:443 Identity:106/443 - (23%)
Similarity:186/443 - (41%) Gaps:82/443 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 LATSDRIANSVLNFA-----NILGQHLANGKTQIYSPLSIVHSLALLLLGAKGRSYEELSTVFDI 161
            |..|.:::|...:|.     .|..:|..|   .|:||..:..::..|:|||||.           
  Rat    61 LRASQQLSNETSSFGFSLLRKISMRHDGN---VIFSPFGLSVAMVNLMLGAKGE----------- 111

  Fly   162 PDTSRLHEQFGLMLQDLQQPTREAISAG---RPLTDWRASSAMRSNRRAQRPGAHEVHLANG--L 221
               :::..:.||.||.|.|       ||   .|....|......||::        :.|..|  .
  Rat   112 ---TKVQVENGLNLQALSQ-------AGPLILPALFKRVKETFSSNKK--------LGLTQGSFA 158

  Fly   222 FTQTGYTLNPDYRRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIASDIPQTTR 286
            |....:.:...|..:....:.::....:|..| :.||..:|.|:.:.|:..|..:. .:|...|:
  Rat   159 FIHKDFEIKKTYFNLSTMYFDTEYVPTNFRNS-SQARGLMNHYINKETEGKIPKLF-DEINPETK 221

  Fly   287 MILANALYFKAFWETDFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPYHEDHELGCKIIGLP 351
            :||.:.:.||..|.|.|....|..|.|:.:   ....::|.||...|.:....|.:..|.|:.||
  Rat   222 LILVDYILFKGKWLTPFDPIFTEADTFHLD---KYKAVKVPMMYREGNFASTFDKKFRCHILKLP 283

  Fly   352 YRGNLSTMYIIQPFKSSVRELMALQKRLTADKIESMISRMYRRAALVAFPKMHLTESVNLKTVMQ 416
            |:|| :||.::...||.  :.:||:..||.|.:|..:..|..|...|.|||..|.:...:..:::
  Rat   284 YQGN-ATMLVVLMEKSG--DHLALEDYLTTDLVEMWLQDMKTRKMEVFFPKFKLNQRYEMHELLK 345

  Fly   417 RMGLGGIF--SAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDF 479
            ::|:..||  ||..::||.:|.|                              |.|..:|.:...
  Rat   346 QVGIRRIFSTSADLSELSAVARN------------------------------LQVSKVVQQSVL 380

  Fly   480 TVNEQGTEAAASSVTYLKKSGPDVLFRGDTPFMVLVRHDPTKLVLFYGLINEP 532
            .|:|:|||..:.:|:.:.......:.:.|.||..::..:.::::||.|.:..|
  Rat   381 EVDERGTEVVSGTVSEITAYCMPPVIKVDRPFHFIIYEEMSQMLLFLGRVVNP 433

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 101/427 (24%)
Serpina10NP_598301.2 SERPIN 66..430 CDD:294093 103/433 (24%)
Heparin-binding. /evidence=ECO:0000250 128..145 4/16 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D491891at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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