DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Serpini2

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001127881.1 Gene:Serpini2 / 171149 RGDID:619897 Length:405 Species:Rattus norvegicus


Alignment Length:420 Identity:97/420 - (23%)
Similarity:186/420 - (44%) Gaps:76/420 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 LANGKTQIYSPLSIVHSLALLLLGAKGRSYEELSTVFDIPDTSRLHEQFGLMLQDLQQPTREAIS 187
            |:|....|:|||.....|.::.|||||::.:::.....:..|| ..|:|.::     :....|||
  Rat    39 LSNKNNVIFSPLGTTVLLGMVQLGAKGKAQQQIMQTLRMQKTS-TGEEFSVL-----KSLFSAIS 97

  Fly   188 AGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPDYRRVIVEVYASDLQIQDFEG 252
                                ::......:||:.|:.|.|:.:...|.....|.:.|..::.||..
  Rat    98 --------------------KKKQEFTFNLASALYLQEGFIVKESYLHSNKEFFQSATKLVDFLD 142

  Fly   253 SPATARYNINAYVAQHTKNHIENIIA-SDIPQTTRMILANALYFKAFWETDFIESATRPDNFYPN 316
            :..:|: .|:.:|...|...|:|:.: .|....||::|.||:|||..|:..|.:..|...:|...
  Rat   143 AKTSAQ-AISTWVESKTDGKIKNMFSEEDFGPLTRLVLVNAIYFKGDWKQKFRKEDTEMTDFSKK 206

  Fly   317 GEGTE--PVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNLSTMYIIQPFKS-SVRELMALQKR 378
            ...|.  |:|:..:.|   .|.|..:..:..:::.|||:.:..::.|:.|.:. ::.|   ::|:
  Rat   207 DGSTVKIPMMKALLRA---KYGYFSESSMTYQVLELPYKADEFSLVILLPTEDVNIEE---VEKQ 265

  Fly   379 LTADKIESMISRMYRRAALVAFPKMHLTESVNLKTVMQRMGLGGIFSAVQNDLSLIATNEATRTN 443
            :||..::...|.::.....|:.|:..:.:.::.|..:..:.:..|||                  
  Rat   266 VTARHVQKWFSELHEEEVEVSLPRFKIEQKLDFKEALFSLNVTEIFS------------------ 312

  Fly   444 ALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNEQGTEAAASSVTYLKKSGPDVL---- 504
              ||..|..:...         |:|.|...:.||.|.:||.|:|||||:...:    |.::    
  Rat   313 --GGCDLSGITDS---------SELYVSRAMQKVFFEINEDGSEAAASTGINI----PAIMSLTQ 362

  Fly   505 --FRGDTPFMVLVRHDPTKLVLFYGLINEP 532
              |..:.||:.:::|..|:.:||.|.:.:|
  Rat   363 TQFLANHPFLFIMKHIQTESILFMGKVTDP 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 95/413 (23%)
Serpini2NP_001127881.1 SERPIN 23..405 CDD:294093 97/420 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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