DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and Serpini1

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_446231.1 Gene:Serpini1 / 116459 RGDID:619896 Length:410 Species:Rattus norvegicus


Alignment Length:442 Identity:107/442 - (24%)
Similarity:204/442 - (46%) Gaps:83/442 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 DRIANSVLNFANILGQHL-ANGKTQ--IYSPLSIVHSLALLLLGAKGRSYEELSTVFDIPDTSRL 167
            :.||...:|..|    || |.|:.:  ::|||||..::.::.|||:|.:.:|            :
  Rat    24 ETIAEWSVNVYN----HLRATGEDENILFSPLSIALAMGVMELGAQGSTLKE------------I 72

  Fly   168 HEQFGLMLQDLQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPD 232
            ....|.          |::.:|...:..|..|:|.|    ...|.:.:.:||.||.|.|:.:|.:
  Rat    73 RHSMGY----------ESLKSGEEFSFLRDFSSMVS----AEEGQYVMKIANSLFVQNGFHINEE 123

  Fly   233 YRRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIA-SDIPQTTRMILANALYFK 296
            :.:::...:.:::...||..:.|.|.| ||.:|..:|.:.:::::: .|....|.:.|.||:|||
  Rat   124 FLQMMKMYFNAEVNHVDFSENVAVANY-INKWVENYTNSLLKDLVSPGDFDAVTHLALINAVYFK 187

  Fly   297 AFWETDFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPYHE----DHELG--CKIIGLPYRGN 355
            ..|::.|....||..:|..:.|..   :::.||...|.:.|.|    .:|.|  .:::.:||.|:
  Rat   188 GNWKSQFRPENTRTFSFTKDDESE---VQIPMMYQQGEFYYGEFSDGSNEAGGIYQVLEIPYEGD 249

  Fly   356 -LSTMYIIQPFKSSVRELMALQKRLTADKIESMISRMYRRAALVAFPKMHLTESVNLKTVMQRMG 419
             :|.|.::.  :..| .|..|:..|....||...:.:.::...|..|:..:.:.::||.:::.:|
  Rat   250 EISMMLVLS--RQEV-PLATLEPLLKPQLIEEWANSVKKQKVEVYLPRFTVEQEIDLKDILKALG 311

  Fly   420 LGGIFSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNEQ 484
            :..||.   .|.:|.|.::                          :.:|.:...|||....|||:
  Rat   312 VTEIFI---KDANLTAMSD--------------------------KKELFLSKAVHKSFIEVNEE 347

  Fly   485 GTEAAASS----VTYLKKSGPDVLFRGDTPFMVLVRHDPTKLVLFYGLINEP 532
            |:|||.:|    ::.:....|.|:.  |.||:.|:::..|..:||.|.:..|
  Rat   348 GSEAAVASGMIAISRMAVLFPQVIV--DHPFLFLIKNRKTGTILFMGRVMHP 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 103/430 (24%)
Serpini1NP_446231.1 neuroserpin 23..410 CDD:239003 107/442 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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