DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and LOC103911083

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:XP_009299884.1 Gene:LOC103911083 / 103911083 -ID:- Length:262 Species:Danio rerio


Alignment Length:259 Identity:59/259 - (22%)
Similarity:99/259 - (38%) Gaps:35/259 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 LHEQFGLMLQDLQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNP 231
            :|:.|..:|:|:...|.|.|..|                             ..|:....:..:.
Zfish     1 MHQLFHSLLEDIGNRTGEDIDIG-----------------------------TALYASDRFKPHS 36

  Fly   232 DYRRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIASDIPQTTRMILANALYFK 296
            .:...:.|.|.||....||.......:  ||.||.:.|...| |....|:.:.|.|:|...:|||
Zfish    37 KFLEDMKEFYHSDGFTVDFRVKETVDQ--INKYVEEKTHGKI-NQAVDDLEEDTLMLLLTYIYFK 98

  Fly   297 AFWETDFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNLSTMYI 361
            ..|:..|....|....|:.:.:.|.|   ||||........:.|.||..|::.|.|..:.|....
Zfish    99 GKWDKPFNPETTSESTFHIDDKTTVP---VQMMHQYERVKVYYDAELSTKVLCLDYNDSFSMFLA 160

  Fly   362 IQPFKSSVRELMALQKRLTADKIESMISRMYRRAALVAFPKMHLTESVNLKTVMQRMGLGGIFS 425
            :.......:.:..|:..::...:|.....:..|...:..||:.|..|.:||.:::.||:..:||
Zfish   161 VPDVHMGRKTIKDLEMTVSRQHVEKWRRSVSERIVDIYVPKLSLKASYSLKDILKGMGMADMFS 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 59/259 (23%)
LOC103911083XP_009299884.1 SERPIN 1..242 CDD:294093 59/259 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D491891at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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