DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and LOC100909605

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:XP_006240581.2 Gene:LOC100909605 / 100909605 RGDID:6502633 Length:410 Species:Rattus norvegicus


Alignment Length:427 Identity:105/427 - (24%)
Similarity:182/427 - (42%) Gaps:99/427 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 KTQIYSPLSIVHSLALLLLGAKGRSYEEL--STVFDIPDT--SRLHEQFGLMLQDLQQPTREA-I 186
            |..::|..||..:|.||.||||..:.:|:  ...|::.:|  :.:|:.:..:||.|..|..:. |
  Rat    59 KNIVFSSFSISTALVLLSLGAKNNTLKEILEGLKFNLTETPEAEIHQGYEHLLQRLNLPGDQVQI 123

  Fly   187 SAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPDYRRVIVEVYASDLQIQDFE 251
            |.|                             :.||.:....:..:::.....:|.::....||:
  Rat   124 STG-----------------------------SALFIKKHLQILAEFQEKARALYQAEAFSTDFQ 159

  Fly   252 GSPATARYNINAYVAQHTKNHIENIIASDIPQTTRMILANALYFKAFWETDFIESATRPDNFYPN 316
             .|..|:..||.||.:.|:..|:.:| |.:.:.|.|:|.|.:|||..|:..|....|....||.:
  Rat   160 -QPHEAKKLINDYVRKQTQGKIKELI-SVLDKKTSMVLVNYIYFKGKWKMPFDPHDTFQSEFYLD 222

  Fly   317 GEGT--EPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNLSTMYIIQPFKSSVRELMALQKRL 379
            .:.:  .|:|:::.:.|    ||..|.||.|.::.|.|.||.|.::|: |.:..::::.|..:..
  Rat   223 EKKSVKVPMMKIEKLTT----PYFRDEELSCSVLELKYTGNASALFIL-PDQGRMQQVEASLQPE 282

  Fly   380 TADKIESMISRMYRRAALVAFPKMHLTESVNLKTVMQRMGLGGIFSAVQNDLSLIATNEATRTNA 444
            |..:.:..:..  ||...:..||..::..:.|..::..:|:..:||. |.|||.|.         
  Rat   283 TLRRWKDTLRP--RRIDELRMPKFSISTDMRLGDILPELGIREVFSQ-QADLSRIT--------- 335

  Fly   445 LGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNEQGTEAAASS-------------VT-Y 495
                              ||: ||.|..:|||....|.|.||||||::             || |
  Rat   336 ------------------GAK-DLSVSQVVHKAVLDVTETGTEAAAATGVKIIPMCAKFYYVTMY 381

  Fly   496 LKKSGPDVLFRGDTPFMVLVRHDPTKLVLFYGLINEP 532
            ..:           ||::::....|.:.||...:..|
  Rat   382 FNR-----------PFLMIISDTNTHIALFMAKVTNP 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 104/420 (25%)
LOC100909605XP_006240581.2 alpha-1-antitrypsin_like 41..404 CDD:239011 104/422 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D491891at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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