DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and serpina1

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:XP_004917137.1 Gene:serpina1 / 100145012 XenbaseID:XB-GENE-5804366 Length:485 Species:Xenopus tropicalis


Alignment Length:478 Identity:112/478 - (23%)
Similarity:198/478 - (41%) Gaps:102/478 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 NGLGNQNDPALNRISGT-----SVKPSNLPAAYSNGYVDLATSDRIANSVLNFANILGQHLANGK 127
            :|.|..:|...:..:|.     .:.|||...|:.                 .|..::..|  ..:
 Frog    95 HGKGKHHDHKHHHHAGEDMACHKIAPSNSQFAFK-----------------LFRQVVADH--PSE 140

  Fly   128 TQIYSPLSIVHSLALLLLGAKGRSYEELSTVFDIPDT----SRLHEQFGLMLQDLQQPTREAISA 188
            ...:||:||..:||:|.|||:..:..::....:..:|    ..:|..|..:|..|..|.||.   
 Frog   141 NIFFSPVSISTALAMLSLGARADTLNQIIEGLNFNNTKITEEEIHNGFQHLLHMLNDPDREL--- 202

  Fly   189 GRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPDYRRVIVEVYASDLQIQDFEGS 253
                                     :::..|.||......|...:...:.:.|.|:....||..:
 Frog   203 -------------------------QLNSGNALFIDNNVKLIQQFIDDVKKYYESEAFSTDFNNA 242

  Fly   254 PATARYNINAYVAQHTKNHIENIIASDIPQTTRMILANALYFKAFWETDFIESATRPDNFYPNGE 318
             ..|:..||:||.:.|...|.::::| :.:...:.|.|.::|:..||..|.|..|: |..:...|
 Frog   243 -EEAKKQINSYVEKQTHGKIVDLLSS-VDKNAVLYLINYIFFRGKWEKPFEEKFTQ-DGIFHVDE 304

  Fly   319 GTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNLSTMYIIQPFKSSVRELMALQKRLTADK 383
            .|.  :.|.||...|.|....|.:|||.::.:||:||.:.::|: |.:..:|:   :::.|....
 Frog   305 NTN--VTVPMMRRNGMYNVAFDEKLGCTVVQIPYKGNATALFIL-PDEGKLRQ---VEEALEKST 363

  Fly   384 IESMISRMYRRAALVAFPKMHLTESVNLKTVMQRMGLGGIFSAVQN-DLSLIATNEATRTNALGG 447
            |.|...:...::..:..||..:..:::|...:::.|:..:||  || |||.|.            
 Frog   364 IMSWKKQFRYQSIELTIPKFSIMATLDLIEELKKFGVTDVFS--QNADLSGIV------------ 414

  Fly   448 NSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFTVNEQGTEAAASSVTYLKKS--GPDVLFRGDTP 510
                       .||     .|.|...|||...:|:|.||||||::...:...  .|.:||  :..
 Frog   415 -----------EGT-----PLKVSKAVHKAGLSVDETGTEAAAATAFEIMPMMIPPHILF--NRA 461

  Fly   511 FMVLVRHDP-TKLVLFYGLINEP 532
            |:|:: :|| .|.:||...:..|
 Frog   462 FVVII-YDPIPKSILFVAKVVNP 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 103/423 (24%)
serpina1XP_004917137.1 serpin 115..484 CDD:393296 108/458 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D491891at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X28
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.020

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