DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spn28Dc and zgc:174260

DIOPT Version :9

Sequence 1:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster
Sequence 2:NP_001108176.2 Gene:zgc:174260 / 100137107 ZFINID:ZDB-GENE-080213-9 Length:410 Species:Danio rerio


Alignment Length:513 Identity:118/513 - (23%)
Similarity:183/513 - (35%) Gaps:152/513 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 QQEAQQHIQAIPPAVPLQSPGLVNGLGNQNDPALNRISGTSVKPSNLPAAYSNGYVDLATSDRIA 109
            |:..||      |.:..:.|.|:|   ..||.|.|........|.     |.:            
Zfish    21 QETLQQ------PPISAKLPSLIN---MNNDFAFNLYKRLIESPD-----YQS------------ 59

  Fly   110 NSVLNFANILGQHLANGKTQIYSPLSIVHSLALLLLGAKGRSYEEL-------STVFDIPDTSRL 167
                             |...:||.|:..:|:.|.|||.|.:.::|       ||:|   .|..:
Zfish    60 -----------------KNIFFSPFSVSMALSELSLGAGGDTKQQLLSGIGYNSTIF---STEEM 104

  Fly   168 HEQFGLMLQDLQQPTREAISAGRPLTDWRASSAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPD 232
            |:.|..:|:|:...|...|..|                             ..|:....:..:..
Zfish   105 HQLFHSLLEDIGNRTEVDIDVG-----------------------------TALYASDRFKPHSK 140

  Fly   233 YRRVIVEVYASDLQIQDFEGSPATARYNINAYVAQHTKNHIENIIASDIPQTTRMILANALYFKA 297
            :...:.|.|.||....||.......:  ||.||.:.|...| |....|:.:.|.|:|...:|||.
Zfish   141 FLEDMKEFYHSDGFTVDFRVKETVDQ--INKYVEEKTHGKI-NQAVDDLEEDTFMLLLTYIYFKG 202

  Fly   298 FWETDFIESATRPDNFYPNGEGTEPVMRVQMMATGGAYPY---HEDHELGCKIIGLPYRGNLSTM 359
            .|:..|....|....|:.:.:.|.|   ||||   ..|.|   :.|.||..|::.|.|..:.| |
Zfish   203 KWDKPFNPDTTSESKFHIDDKTTVP---VQMM---HQYEYLKVYYDAELSTKVLCLDYNDSFS-M 260

  Fly   360 YIIQPFKSSVRELMALQKRLTADKIESMISRM----YRRAAL-----VAFPKMHLTESVNLKTVM 415
            ::..|.....|:        |...:|..:||.    :||...     :..||:.|..|.:|..::
Zfish   261 FLAVPDVHMGRK--------TIKDLEMTVSRQHIKKWRRGVSKDEVDIYVPKLSLKTSYSLNDIL 317

  Fly   416 QRMGLGGIFSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDFT 480
            :.||:..:||                              .|...||.:...:.|..::||....
Zfish   318 KGMGMADMFS------------------------------DRADFTGVSEESIFVSQVLHKATLD 352

  Fly   481 VNEQGTEAAASS------VTYLKKSGPDVLFRGDTPFMVLVRHDPTKLVLFYGLINEP 532
            ::||||.|||.:      |:|    .|..:.|.|.|||:.:.......:||:|.:..|
Zfish   353 IDEQGTTAAAVTEVNERLVSY----SPLSIIRFDRPFMIFITDQTNDNILFFGKVVNP 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 103/440 (23%)
zgc:174260NP_001108176.2 alpha-1-antitrypsin_like 39..403 CDD:239011 110/481 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D491891at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.110

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