DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wwox and RDH14

DIOPT Version :10

Sequence 1:NP_609171.1 Gene:Wwox / 34090 FlyBaseID:FBgn0031972 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_065956.1 Gene:RDH14 / 57665 HGNCID:19979 Length:336 Species:Homo sapiens


Alignment Length:304 Identity:113/304 - (37%)
Similarity:169/304 - (55%) Gaps:28/304 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 LHGRTALITGANCGIGYETARSLAHHGCEIIFACRNRSSAEAAIERIAQE-RPAAR--------- 173
            :||:|.||||||.|:|..||..|...|..:|..||:|:.||.|..::.:| |.||.         
Human    41 MHGKTVLITGANSGLGRATAAELLRLGARVIMGCRDRARAEEAAGQLRRELRQAAECGPEPGVSG 105

  Fly   174 -SRCRFAALDLSSLRSVQRFVEEIKQSVSHIDYLILNAGVFALPYTRTVDGLETTFQVSHLSHFY 237
             .......|||:|||||:.|.:|:.|....:|.||.|||:|..||.:|.||.|..|.|:||.||.
Human   106 VGELIVRELDLASLRSVRAFCQEMLQEEPRLDVLINNAGIFQCPYMKTEDGFEMQFGVNHLGHFL 170

  Fly   238 LTLQLETLF--DYKTRIIVLSSESHRFANLPVENLAVHHLSPPPEKYWSMMAYNNAKLCNVLFAQ 300
            ||..|..|.  ...:||:|:||:.:::.::..::|      ...:.|.....|:.:||.|:||.:
Human   171 LTNLLLGLLKSSAPSRIVVVSSKLYKYGDINFDDL------NSEQSYNKSFCYSRSKLANILFTR 229

  Fly   301 ELAQRWKQRGISVFSLHPGNMVSSDLSRNYWFYRL---LFAIVR-PFTKSLQQAAATSIYCATAN 361
            |||:|.:...::|..|||| :|.::|.|:.....|   ||.:|. .|.|:..:.|.||||.|::.
Human   230 ELARRLEGTNVTVNVLHPG-IVRTNLGRHIHIPLLVKPLFNLVSWAFFKTPVEGAQTSIYLASSP 293

  Fly   362 ELTGLSGLYFNNCFFCE--PSKLSKSAALQQQLWKLSENLIAEL 403
            |:.|:||.||.:|...|  |..:.:|.|  ::||.:||.::..|
Human   294 EVEGVSGRYFGDCKEEELLPKAMDESVA--RKLWDISEVMVGLL 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
WwoxNP_609171.1 WW 13..43 CDD:197736
human_WWOX_like_SDR_c-like 121..402 CDD:187669 111/299 (37%)
RDH14NP_065956.1 retinol-DH_like_SDR_c 43..328 CDD:212495 109/293 (37%)
Blue background indicates that the domain is not in the aligned region.

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